Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AL139344.1-201ENST00000605228 195 ntBASIC6.97□□□□□ -1.29
CHAMP1Q96JM3 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.97□□□□□ -1.29
CHAMP1Q96JM3 AC009090.3-201ENST00000616553 565 ntBASIC6.97□□□□□ -1.29
CHAMP1Q96JM3 MIR6886-201ENST00000619864 61 ntBASIC6.97□□□□□ -1.29
CHAMP1Q96JM3 SNX18P12-201ENST00000624821 759 ntBASIC6.97□□□□□ -1.29
CHAMP1Q96JM3 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.97□□□□□ -1.29
CHAMP1Q96JM3 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.97□□□□□ -1.29
CHAMP1Q96JM3 AC079776.5-201ENST00000641920 211 ntBASIC6.97□□□□□ -1.29
CHAMP1Q96JM3 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CHAMP1Q96JM3 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.97□□□□□ -1.29
CHAMP1Q96JM3 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.97□□□□□ -1.29
CHAMP1Q96JM3 AC009135.2-201ENST00000624136 1768 ntBASIC6.97□□□□□ -1.29
CHAMP1Q96JM3 PARP4P2-201ENST00000446672 3326 ntBASIC6.97□□□□□ -1.29
CHAMP1Q96JM3 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CHAMP1Q96JM3 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CHAMP1Q96JM3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CHAMP1Q96JM3 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CHAMP1Q96JM3 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
CHAMP1Q96JM3 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CHAMP1Q96JM3 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
CHAMP1Q96JM3 AC022325.1-201ENST00000502748 2199 ntBASIC6.96□□□□□ -1.29
CHAMP1Q96JM3 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CHAMP1Q96JM3 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.96□□□□□ -1.29
CHAMP1Q96JM3 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.96□□□□□ -1.29
CHAMP1Q96JM3 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.96□□□□□ -1.29
CHAMP1Q96JM3 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.96□□□□□ -1.29
CHAMP1Q96JM3 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.96□□□□□ -1.29
CHAMP1Q96JM3 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CHAMP1Q96JM3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CHAMP1Q96JM3 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 RNA5SP279-201ENST00000365513 117 ntBASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AL445183.3-201ENST00000414168 502 ntBASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 USP9YP11-201ENST00000427537 717 ntBASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AC073410.1-201ENST00000435125 589 ntBASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 KATNBL1P3-201ENST00000443475 909 ntBASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 ZNF619P1-201ENST00000446539 752 ntBASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AC106822.1-201ENST00000502647 526 ntBASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 MTND1P22-201ENST00000510572 951 ntBASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AC109464.1-201ENST00000511091 819 ntBASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 RNA5SP434-201ENST00000516647 121 ntBASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AP000916.1-201ENST00000533869 835 ntBASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AC126615.2-201ENST00000553003 515 ntBASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AC016180.1-201ENST00000567945 403 ntBASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AC002310.3-201ENST00000569728 723 ntBASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 PIGPP4-201ENST00000584447 307 ntBASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AC013244.1-201ENST00000604279 193 ntBASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AC025588.2-201ENST00000604851 466 ntBASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AL136295.6-201ENST00000610486 658 ntBASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 MSL3P1-202ENST00000440028 1468 ntBASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 CIR1P2-201ENST00000514821 1342 ntBASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 AL049634.1-201ENST00000453770 1720 ntBASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
CHAMP1Q96JM3 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.95□□□□□ -1.3
CHAMP1Q96JM3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
CHAMP1Q96JM3 AL359715.3-201ENST00000569267 2123 ntBASIC6.95□□□□□ -1.3
CHAMP1Q96JM3 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CHAMP1Q96JM3 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CHAMP1Q96JM3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.95□□□□□ -1.3
CHAMP1Q96JM3 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CHAMP1Q96JM3 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.95□□□□□ -1.3
CHAMP1Q96JM3 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CHAMP1Q96JM3 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
CHAMP1Q96JM3 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CHAMP1Q96JM3 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms