Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RPL5P19-201ENST00000404228 893 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 AL136131.1-201ENST00000406079 803 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 RNU6-564P-201ENST00000410983 104 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 GPS2P1-201ENST00000411761 986 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 BMS1P17-202ENST00000416720 316 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 RPL34P3-201ENST00000421454 338 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 HMGN1P2-201ENST00000445197 310 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 RN7SL583P-201ENST00000475692 287 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 MTND3P6-201ENST00000485242 339 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 RPSAP51-201ENST00000497462 645 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 CYCSP22-201ENST00000517555 339 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 NRBF2P4-201ENST00000520874 850 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 OR4V1P-201ENST00000525394 1140 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 MTATP6P25-201ENST00000574491 261 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 AC005726.4-201ENST00000582858 458 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 AL365181.4-201ENST00000609800 547 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 AC010632.3-201ENST00000611377 369 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 AP005431.1-201ENST00000618479 319 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 AC008691.1-209ENST00000642094 814 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDLIM5Q96HC4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AC100757.1-201ENST00000616872 1835 ntBASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 RNU6-670P-201ENST00000364312 104 ntBASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 RN7SKP6-201ENST00000364795 319 ntBASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AL662874.1-201ENST00000426065 230 ntBASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AL136231.1-201ENST00000429407 730 ntBASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 MTCO1P45-201ENST00000431457 267 ntBASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 XKRYP6-201ENST00000440468 1116 ntBASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 XKRYP3-201ENST00000442113 1116 ntBASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AC069277.2-201ENST00000454211 432 ntBASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AP000547.1-201ENST00000454360 617 ntBASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 LDHBP2-201ENST00000456969 1005 ntBASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AP000797.2-201ENST00000475768 606 ntBASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AP004609.2-201ENST00000532177 190 ntBASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AC018552.1-201ENST00000562099 811 ntBASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AC027216.1-201ENST00000577726 685 ntBASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 SNX6P1-201ENST00000601728 1224 ntBASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AC002069.2-201ENST00000603580 883 ntBASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AC022387.2-201ENST00000604050 448 ntBASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AC073869.8-201ENST00000641806 335 ntBASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms