Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
ECHDC3Q96DC8 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
ECHDC3Q96DC8 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
ECHDC3Q96DC8 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
ECHDC3Q96DC8 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
ECHDC3Q96DC8 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.4□□□□□ -1.55
ECHDC3Q96DC8 AL353796.1-201ENST00000561542 3241 ntBASIC5.4□□□□□ -1.55
ECHDC3Q96DC8 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 AL034549.2-201ENST00000618285 3373 ntBASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 AC097063.1-201ENST00000426714 1797 ntBASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 AC068870.3-201ENST00000625077 2536 ntBASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 RNU6-171P-201ENST00000384354 107 ntBASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 AL050305.1-201ENST00000399993 1230 ntBASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 AL355433.1-201ENST00000422804 300 ntBASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 AC093655.2-201ENST00000425735 631 ntBASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 OR52B5P-201ENST00000435337 951 ntBASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 AC058823.1-201ENST00000485315 474 ntBASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 OR4A43P-201ENST00000532938 908 ntBASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 AC010487.1-201ENST00000594408 1172 ntBASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 AC090527.3-201ENST00000619041 548 ntBASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 AP003400.3-201ENST00000624904 346 ntBASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 AC074101.1-201ENST00000637861 241 ntBASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 OR52B5P-202ENST00000641118 1110 ntBASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 CASC19-260ENST00000641828 2001 ntBASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ECHDC3Q96DC8 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 AC010266.2-201ENST00000564741 3255 ntBASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 RNA5SP453-201ENST00000362503 119 ntBASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 RNU1-146P-201ENST00000364015 165 ntBASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 SNORA67-201ENST00000384423 137 ntBASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 RNU1-149P-201ENST00000390870 161 ntBASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 AP000534.2-201ENST00000412729 568 ntBASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 AL133482.1-201ENST00000415988 498 ntBASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 FAM96AP1-201ENST00000430879 482 ntBASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 AL359265.1-201ENST00000440296 795 ntBASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 CNOT7P2-201ENST00000441051 832 ntBASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 RPS11P7-201ENST00000442125 465 ntBASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 AC023271.1-201ENST00000445936 1090 ntBASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 AL606490.1-201ENST00000452266 765 ntBASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 RPS4XP1-201ENST00000482189 787 ntBASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 RN7SL423P-201ENST00000486202 304 ntBASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 RN7SL629P-201ENST00000489622 285 ntBASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 RNA5SP34-201ENST00000516887 130 ntBASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 MIR1269B-201ENST00000580405 75 ntBASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 MIR7853-201ENST00000584820 132 ntBASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 AC069307.1-201ENST00000602820 447 ntBASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 RARSP1-201ENST00000542842 1418 ntBASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ECHDC3Q96DC8 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms