Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC063977.5-201ENST00000601044 974 ntBASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 AC244107.2-201ENST00000611773 76 ntBASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 MIR6793-201ENST00000612376 63 ntBASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 AC135068.5-201ENST00000624197 983 ntBASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CCDC112Q8NEF3 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 AP005432.1-201ENST00000580891 3485 ntBASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 SMG1P7-201ENST00000565246 2704 ntBASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 OR7E25P-201ENST00000344844 931 ntBASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 RPL10P10-201ENST00000403509 664 ntBASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 RN7SKP206-201ENST00000410823 293 ntBASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 AL354890.1-201ENST00000413730 346 ntBASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 BX284632.2-201ENST00000421091 399 ntBASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 AL512605.1-202ENST00000441919 381 ntBASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 AL359955.2-201ENST00000445380 353 ntBASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 RPS3AP15-201ENST00000483874 781 ntBASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 AC106872.4-201ENST00000510050 523 ntBASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 MTATP6P1-201ENST00000514057 681 ntBASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 AC022360.1-201ENST00000521058 340 ntBASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 AC079600.1-201ENST00000550326 297 ntBASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 AL049840.6-201ENST00000604583 345 ntBASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 MIR6729-201ENST00000618194 65 ntBASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 MIR6839-201ENST00000620425 113 ntBASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 AL512356.3-201ENST00000623005 461 ntBASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 AC068870.3-201ENST00000625077 2536 ntBASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 STX3-208ENST00000641815 3236 ntBASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC112Q8NEF3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 AC007996.1-201ENST00000620414 2821 ntBASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 OR9G4-201ENST00000302957 984 ntBASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 UBBP2-201ENST00000376781 231 ntBASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 RNA5SP284-201ENST00000384547 118 ntBASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 AL031985.1-201ENST00000392713 418 ntBASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 RN7SKP97-201ENST00000410966 333 ntBASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 AC007738.1-201ENST00000413892 348 ntBASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 AC124944.2-201ENST00000429866 1242 ntBASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 RPL23AP19-201ENST00000436229 369 ntBASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 AC006335.2-201ENST00000437993 330 ntBASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 VN1R110P-201ENST00000438988 971 ntBASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 AL391987.1-201ENST00000441025 200 ntBASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 RPSAP37-201ENST00000470913 821 ntBASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 PPIAP19-201ENST00000486414 492 ntBASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 RPL15P21-201ENST00000495592 567 ntBASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 AC006499.4-201ENST00000510947 694 ntBASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 OR5H7P-201ENST00000514084 930 ntBASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 RN7SL435P-201ENST00000584418 282 ntBASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 AC108673.3-201ENST00000609183 335 ntBASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 AP000894.4-201ENST00000610185 483 ntBASIC5.93□□□□□ -1.46
CCDC112Q8NEF3 AC025574.2-201ENST00000615621 514 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms