Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC50Q8IVM0 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC50Q8IVM0 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC50Q8IVM0 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.71□□□□□ -1.5
CCDC50Q8IVM0 AP000769.2-201ENST00000602344 396 ntBASIC5.71□□□□□ -1.5
CCDC50Q8IVM0 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC50Q8IVM0 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC50Q8IVM0 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC50Q8IVM0 AC129915.3-201ENST00000634128 948 ntBASIC5.71□□□□□ -1.5
CCDC50Q8IVM0 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC50Q8IVM0 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC50Q8IVM0 AL353796.1-201ENST00000561542 3241 ntBASIC5.71□□□□□ -1.5
CCDC50Q8IVM0 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC50Q8IVM0 AL034549.2-201ENST00000618285 3373 ntBASIC5.71□□□□□ -1.5
CCDC50Q8IVM0 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC50Q8IVM0 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CCDC50Q8IVM0 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC50Q8IVM0 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC50Q8IVM0 AC007996.1-201ENST00000620414 2821 ntBASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 AL450345.1-202ENST00000605741 3881 ntBASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 AL731532.2-201ENST00000623542 1953 ntBASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 RNA5SP241-201ENST00000391326 114 ntBASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 AKR1B10P1-201ENST00000425765 942 ntBASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 GTF3AP5-201ENST00000442645 697 ntBASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 AC005297.1-201ENST00000444765 862 ntBASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 AC109464.1-201ENST00000511091 819 ntBASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 CDC42P3-201ENST00000518493 633 ntBASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 IGKV2-4-201ENST00000523070 340 ntBASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 TOMM20P1-201ENST00000534518 427 ntBASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 RN7SL290P-201ENST00000578661 300 ntBASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 AC009237.13-201ENST00000603193 276 ntBASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 AL499605.1-201ENST00000604628 403 ntBASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 PPATP2-201ENST00000605635 508 ntBASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 AC008691.1-209ENST00000642094 814 ntBASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC50Q8IVM0 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 RN7SKP6-201ENST00000364795 319 ntBASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 CXADRP1-201ENST00000398098 1095 ntBASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 OR2AT2P-201ENST00000413438 905 ntBASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 AL133173.1-201ENST00000423458 397 ntBASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 OR6D1P-201ENST00000436165 939 ntBASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 AL450996.1-201ENST00000445574 1202 ntBASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 AL161722.1-201ENST00000446972 1032 ntBASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 LRRC37A14P-201ENST00000452297 462 ntBASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 SCARNA20.4-201ENST00000516969 131 ntBASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 AP006245.2-201ENST00000522004 300 ntBASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 OR8G3P-201ENST00000533406 921 ntBASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 RBM22P12-201ENST00000567098 1255 ntBASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 MIR4271-201ENST00000582451 67 ntBASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 AC079315.1-201ENST00000602952 623 ntBASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 AL365181.4-201ENST00000609800 547 ntBASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 CXADRP3-202ENST00000617265 1100 ntBASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms