Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 SNORD116-3-201ENST00000384287 95 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 SNORD116-7-201ENST00000384404 95 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 SNORD116-5-201ENST00000384462 95 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VRK3Q8IV63 UBE2V1P9-201ENST00000414760 368 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 AL158050.1-201ENST00000416077 457 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 NPM1P25-201ENST00000429734 854 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 AC110602.1-201ENST00000437414 318 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 ATP5LP2-201ENST00000440646 311 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 RPL6P30-201ENST00000443382 862 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 CST12P-201ENST00000457644 362 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 AC023194.2-201ENST00000465398 406 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 AC020779.1-201ENST00000478757 796 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 NPM1P29-201ENST00000483112 803 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 AC002310.3-201ENST00000569728 723 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 AP000919.1-202ENST00000581139 1264 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 AC103987.3-201ENST00000582071 292 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 AC008507.3-201ENST00000585753 472 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VRK3Q8IV63 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 CCDC58P3-201ENST00000590792 430 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 MIMT1-201ENST00000597105 1050 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 MIR6809-201ENST00000612189 116 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
VRK3Q8IV63 AC092608.3-201ENST00000625017 386 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 AP001052.1-201ENST00000626421 99 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
VRK3Q8IV63 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VRK3Q8IV63 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VRK3Q8IV63 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 AC005225.5-201ENST00000623547 2225 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VRK3Q8IV63 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VRK3Q8IV63 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
VRK3Q8IV63 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VRK3Q8IV63 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VRK3Q8IV63 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VRK3Q8IV63 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VRK3Q8IV63 GNL2P1-201ENST00000451274 2190 ntBASIC5.86□□□□□ -1.47
VRK3Q8IV63 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VRK3Q8IV63 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VRK3Q8IV63 AC099786.3-201ENST00000565735 1410 ntBASIC5.86□□□□□ -1.47
VRK3Q8IV63 MTND4P26-201ENST00000415971 1359 ntBASIC5.86□□□□□ -1.47
VRK3Q8IV63 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VRK3Q8IV63 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 RNU6-192P-201ENST00000391253 100 ntBASIC5.86□□□□□ -1.47
VRK3Q8IV63 OR7E156P-201ENST00000400303 464 ntBASIC5.86□□□□□ -1.47
VRK3Q8IV63 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 OR5M12P-201ENST00000423388 929 ntBASIC5.86□□□□□ -1.47
VRK3Q8IV63 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.86□□□□□ -1.47
VRK3Q8IV63 PPIAP27-201ENST00000453800 265 ntBASIC5.86□□□□□ -1.47
VRK3Q8IV63 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.86□□□□□ -1.47
VRK3Q8IV63 AC104164.1-201ENST00000460282 590 ntBASIC5.86□□□□□ -1.47
VRK3Q8IV63 AC068228.1-201ENST00000461723 211 ntBASIC5.86□□□□□ -1.47
VRK3Q8IV63 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 AC083795.1-201ENST00000491760 320 ntBASIC5.86□□□□□ -1.47
VRK3Q8IV63 AC090543.1-201ENST00000492168 485 ntBASIC5.86□□□□□ -1.47
VRK3Q8IV63 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 AC112518.2-201ENST00000508565 425 ntBASIC5.86□□□□□ -1.47
VRK3Q8IV63 AC118282.2-201ENST00000508739 374 ntBASIC5.86□□□□□ -1.47
VRK3Q8IV63 MTND1P5-201ENST00000517906 940 ntBASIC5.86□□□□□ -1.47
VRK3Q8IV63 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 AC079905.1-201ENST00000549280 475 ntBASIC5.86□□□□□ -1.47
VRK3Q8IV63 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms