Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RIF1Q5UIP0 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RIF1Q5UIP0 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RIF1Q5UIP0 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.21□□□□□ -1.58
RIF1Q5UIP0 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
RIF1Q5UIP0 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RIF1Q5UIP0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RIF1Q5UIP0 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.21□□□□□ -1.58
RIF1Q5UIP0 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
RIF1Q5UIP0 AC069366.1-201ENST00000583159 838 ntBASIC5.21□□□□□ -1.58
RIF1Q5UIP0 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.21□□□□□ -1.58
RIF1Q5UIP0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.21□□□□□ -1.58
RIF1Q5UIP0 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RIF1Q5UIP0 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
RIF1Q5UIP0 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RIF1Q5UIP0 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RIF1Q5UIP0 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RIF1Q5UIP0 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RIF1Q5UIP0 AC017104.4-201ENST00000636283 1592 ntBASIC5.2□□□□□ -1.58
RIF1Q5UIP0 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 RN7SKP224-201ENST00000364140 325 ntBASIC5.2□□□□□ -1.58
RIF1Q5UIP0 GPS2P1-201ENST00000411761 986 ntBASIC5.2□□□□□ -1.58
RIF1Q5UIP0 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 AC073143.1-201ENST00000436316 395 ntBASIC5.2□□□□□ -1.58
RIF1Q5UIP0 RHOT1P3-201ENST00000436571 331 ntBASIC5.2□□□□□ -1.58
RIF1Q5UIP0 MEMO1P4-201ENST00000453590 386 ntBASIC5.2□□□□□ -1.58
RIF1Q5UIP0 AC010618.1-201ENST00000469924 477 ntBASIC5.2□□□□□ -1.58
RIF1Q5UIP0 AC109327.1-201ENST00000471666 403 ntBASIC5.2□□□□□ -1.58
RIF1Q5UIP0 AC140172.1-201ENST00000502928 141 ntBASIC5.2□□□□□ -1.58
RIF1Q5UIP0 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.2□□□□□ -1.58
RIF1Q5UIP0 DSTNP2-201ENST00000504533 515 ntBASIC5.2□□□□□ -1.58
RIF1Q5UIP0 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 MIR3667-201ENST00000581025 74 ntBASIC5.2□□□□□ -1.58
RIF1Q5UIP0 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 SDAD1P1-202ENST00000524156 2051 ntBASIC5.2□□□□□ -1.58
RIF1Q5UIP0 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.2□□□□□ -1.58
RIF1Q5UIP0 AC097063.1-201ENST00000426714 1797 ntBASIC5.2□□□□□ -1.58
RIF1Q5UIP0 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 RN7SKP280-201ENST00000364196 304 ntBASIC5.2□□□□□ -1.58
RIF1Q5UIP0 MIR1182-201ENST00000408363 97 ntBASIC5.2□□□□□ -1.58
RIF1Q5UIP0 AC104634.1-201ENST00000452720 462 ntBASIC5.2□□□□□ -1.58
RIF1Q5UIP0 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 AC139697.1-201ENST00000548429 745 ntBASIC5.2□□□□□ -1.58
RIF1Q5UIP0 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 AL139041.1-201ENST00000605480 610 ntBASIC5.2□□□□□ -1.58
RIF1Q5UIP0 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.2□□□□□ -1.58
RIF1Q5UIP0 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 AC130304.1-201ENST00000622942 2385 ntBASIC5.2□□□□□ -1.58
RIF1Q5UIP0 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RIF1Q5UIP0 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 RN7SKP95-201ENST00000362860 303 ntBASIC5.19□□□□□ -1.58
RIF1Q5UIP0 RNA5SP447-201ENST00000363749 119 ntBASIC5.19□□□□□ -1.58
RIF1Q5UIP0 NUDT19P3-201ENST00000404698 555 ntBASIC5.19□□□□□ -1.58
RIF1Q5UIP0 AL592293.2-201ENST00000422292 996 ntBASIC5.19□□□□□ -1.58
RIF1Q5UIP0 AC007559.1-201ENST00000428736 355 ntBASIC5.19□□□□□ -1.58
RIF1Q5UIP0 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.19□□□□□ -1.58
RIF1Q5UIP0 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 IGLV3-24-201ENST00000517477 197 ntBASIC5.19□□□□□ -1.58
RIF1Q5UIP0 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 AC133555.2-201ENST00000550213 292 ntBASIC5.19□□□□□ -1.58
RIF1Q5UIP0 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
RIF1Q5UIP0 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms