Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 GAPDHP23-201ENST00000444823 993 ntBASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 YWHAEP1-201ENST00000453697 763 ntBASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 OSTCP1-201ENST00000455507 450 ntBASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 AC073594.1-201ENST00000462065 364 ntBASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 RN7SL352P-201ENST00000466002 277 ntBASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 AC011476.1-201ENST00000466725 307 ntBASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 RPL12P30-201ENST00000488389 499 ntBASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 RNU6-491P-201ENST00000516099 110 ntBASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 snoU109.5-201ENST00000516231 132 ntBASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 RNU6-889P-201ENST00000517189 103 ntBASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 AP001858.2-201ENST00000536213 601 ntBASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 AC068305.2-201ENST00000550567 1205 ntBASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 CKS1BP1-201ENST00000555221 240 ntBASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 AL136520.1-202ENST00000555494 763 ntBASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 AC084759.1-201ENST00000561168 290 ntBASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 AL133247.2-201ENST00000603236 482 ntBASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 AC092681.3-201ENST00000609463 678 ntBASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 RNA5SP440-201ENST00000612665 119 ntBASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 AL121890.2-201ENST00000617644 465 ntBASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 AL137067.2-201ENST00000621202 131 ntBASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 AC144833.1-201ENST00000567953 4089 ntBASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PDLIM3Q53GG5 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 OFD1P15Y-201ENST00000411536 1392 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 TRIM51GP-201ENST00000534741 1350 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 VPS35P1-201ENST00000563400 1518 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 U3.7-201ENST00000363668 216 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 RN7SKP160-201ENST00000363804 340 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 OR6K3-202ENST00000368146 996 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 RNU6-40P-201ENST00000384254 107 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 RN7SKP121-201ENST00000410842 305 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 AC245096.1-201ENST00000413104 546 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 RPS7P14-201ENST00000426405 583 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 RPS3AP38-201ENST00000435889 763 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 EMC3-AS1-205ENST00000438698 534 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 RN7SL826P-201ENST00000479724 288 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 RPL23AP40-201ENST00000487630 390 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 OR7E99P-201ENST00000505750 922 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 AC025470.1-201ENST00000510053 2032 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 RNU6-467P-201ENST00000517027 110 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 AC079600.1-201ENST00000550326 297 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 MRPS21P8-201ENST00000569196 235 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 AP001496.3-201ENST00000580230 913 ntBASIC4.93□□□□□ -1.62
PDLIM3Q53GG5 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms