Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
H3F3AP84243 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.84□□□□□ -1.63
H3F3AP84243 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
H3F3AP84243 MTCO1P7-201ENST00000419523 1542 ntBASIC4.84□□□□□ -1.63
H3F3AP84243 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
H3F3AP84243 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
H3F3AP84243 U3.25-201ENST00000391209 220 ntBASIC4.84□□□□□ -1.63
H3F3AP84243 OR3A2-201ENST00000408891 1076 ntBASIC4.84□□□□□ -1.63
H3F3AP84243 AL445213.1-201ENST00000412589 747 ntBASIC4.84□□□□□ -1.63
H3F3AP84243 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.84□□□□□ -1.63
H3F3AP84243 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.84□□□□□ -1.63
H3F3AP84243 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.84□□□□□ -1.63
H3F3AP84243 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.84□□□□□ -1.63
H3F3AP84243 CYCSP12-201ENST00000437729 300 ntBASIC4.84□□□□□ -1.63
H3F3AP84243 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.84□□□□□ -1.63
H3F3AP84243 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.84□□□□□ -1.63
H3F3AP84243 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
H3F3AP84243 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.84□□□□□ -1.63
H3F3AP84243 AC106872.4-201ENST00000510050 523 ntBASIC4.84□□□□□ -1.63
H3F3AP84243 RNA5SP362-201ENST00000516048 118 ntBASIC4.84□□□□□ -1.63
H3F3AP84243 RN7SKP99-201ENST00000517028 307 ntBASIC4.84□□□□□ -1.63
H3F3AP84243 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.84□□□□□ -1.63
H3F3AP84243 AC027026.1-201ENST00000532323 742 ntBASIC4.84□□□□□ -1.63
H3F3AP84243 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
H3F3AP84243 RN7SL356P-201ENST00000582228 248 ntBASIC4.84□□□□□ -1.63
H3F3AP84243 MIR4660-201ENST00000583549 74 ntBASIC4.84□□□□□ -1.63
H3F3AP84243 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.84□□□□□ -1.63
H3F3AP84243 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
H3F3AP84243 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.84□□□□□ -1.63
H3F3AP84243 AP000769.2-201ENST00000602344 396 ntBASIC4.84□□□□□ -1.63
H3F3AP84243 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
H3F3AP84243 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.84□□□□□ -1.63
H3F3AP84243 OR9K1P-202ENST00000641111 3217 ntBASIC4.84□□□□□ -1.63
H3F3AP84243 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
H3F3AP84243 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.84□□□□□ -1.64
H3F3AP84243 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
H3F3AP84243 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.84□□□□□ -1.64
H3F3AP84243 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
H3F3AP84243 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
H3F3AP84243 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.84□□□□□ -1.64
H3F3AP84243 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
H3F3AP84243 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
H3F3AP84243 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
H3F3AP84243 ICE2P1-201ENST00000512800 1849 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
H3F3AP84243 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.83□□□□□ -1.64
H3F3AP84243 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
H3F3AP84243 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 Z83820.1-201ENST00000456978 1499 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
H3F3AP84243 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
H3F3AP84243 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
H3F3AP84243 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
H3F3AP84243 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
H3F3AP84243 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
H3F3AP84243 MIR133B-201ENST00000362210 119 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 RNA5SP183-201ENST00000362452 119 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 RN7SKP145-201ENST00000363291 303 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 RN7SKP160-201ENST00000363804 340 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 RNA5SP335-201ENST00000363817 110 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
H3F3AP84243 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
H3F3AP84243 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.83□□□□□ -1.64
H3F3AP84243 AC009784.1-201ENST00000426484 460 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.83□□□□□ -1.64
H3F3AP84243 GSTM5P1-201ENST00000434751 660 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
H3F3AP84243 SPRYD7P1-201ENST00000443861 570 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.83□□□□□ -1.64
H3F3AP84243 GAPDHP25-201ENST00000447061 1001 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 AC092754.1-201ENST00000472975 479 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 AP000797.2-201ENST00000475768 606 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 AC108693.1-201ENST00000496068 432 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.83□□□□□ -1.64
H3F3AP84243 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.83□□□□□ -1.64
H3F3AP84243 RNA5SP230-201ENST00000517039 122 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.83□□□□□ -1.64
H3F3AP84243 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.83□□□□□ -1.64
H3F3AP84243 AC005341.1-201ENST00000571086 708 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 AC010632.3-201ENST00000611377 369 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 AC244107.2-201ENST00000611773 76 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
H3F3AP84243 AP003400.3-201ENST00000624904 346 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
H3F3AP84243 AL049767.1-202ENST00000637826 242 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 AC073869.7-201ENST00000640874 297 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
H3F3AP84243 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
H3F3AP84243 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
H3F3AP84243 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
H3F3AP84243 MRRFP1-201ENST00000435941 1675 ntBASIC4.83□□□□□ -1.64
H3F3AP84243 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
H3F3AP84243 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.82□□□□□ -1.64
H3F3AP84243 AC116158.1-201ENST00000560231 2129 ntBASIC4.82□□□□□ -1.64
H3F3AP84243 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.82□□□□□ -1.64
H3F3AP84243 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
H3F3AP84243 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
H3F3AP84243 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.82□□□□□ -1.64
H3F3AP84243 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms