Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RPL39P62891 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC3.64□□□□□ -1.83
RPL39P62891 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
RPL39P62891 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RPL39P62891 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RPL39P62891 MIR375-201ENST00000362103 64 ntBASIC3.64□□□□□ -1.83
RPL39P62891 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC3.64□□□□□ -1.83
RPL39P62891 SUGT1P2-201ENST00000379452 992 ntBASIC3.64□□□□□ -1.83
RPL39P62891 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC3.64□□□□□ -1.83
RPL39P62891 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC3.64□□□□□ -1.83
RPL39P62891 AC019185.1-201ENST00000442718 389 ntBASIC3.64□□□□□ -1.83
RPL39P62891 RPL7AP61-201ENST00000443410 636 ntBASIC3.64□□□□□ -1.83
RPL39P62891 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RPL39P62891 AC104634.1-201ENST00000452720 462 ntBASIC3.64□□□□□ -1.83
RPL39P62891 AL356981.1-201ENST00000454879 684 ntBASIC3.64□□□□□ -1.83
RPL39P62891 AC005165.2-201ENST00000466070 380 ntBASIC3.64□□□□□ -1.83
RPL39P62891 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RPL39P62891 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC3.64□□□□□ -1.83
RPL39P62891 AC044810.1-201ENST00000480271 711 ntBASIC3.64□□□□□ -1.83
RPL39P62891 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC3.64□□□□□ -1.83
RPL39P62891 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC3.64□□□□□ -1.83
RPL39P62891 MRPS5P3-201ENST00000515577 166 ntBASIC3.64□□□□□ -1.83
RPL39P62891 SNORA43.3-201ENST00000517240 103 ntBASIC3.64□□□□□ -1.83
RPL39P62891 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC3.64□□□□□ -1.83
RPL39P62891 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC3.64□□□□□ -1.83
RPL39P62891 BTG1P1-201ENST00000540396 508 ntBASIC3.64□□□□□ -1.83
RPL39P62891 IGBP1P1-201ENST00000554337 1009 ntBASIC3.64□□□□□ -1.83
RPL39P62891 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC3.64□□□□□ -1.83
RPL39P62891 AC002310.3-201ENST00000569728 723 ntBASIC3.64□□□□□ -1.83
RPL39P62891 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC3.64□□□□□ -1.83
RPL39P62891 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC3.64□□□□□ -1.83
RPL39P62891 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
RPL39P62891 AL583832.1-201ENST00000603227 784 ntBASIC3.64□□□□□ -1.83
RPL39P62891 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC3.64□□□□□ -1.83
RPL39P62891 AC022106.2-201ENST00000620114 757 ntBASIC3.64□□□□□ -1.83
RPL39P62891 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
RPL39P62891 5S_rRNA.28-201ENST00000638107 119 ntBASIC3.64□□□□□ -1.83
RPL39P62891 SALL4P2-201ENST00000423288 2910 ntBASIC3.64□□□□□ -1.83
RPL39P62891 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC3.64□□□□□ -1.83
RPL39P62891 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC3.64□□□□□ -1.83
RPL39P62891 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RPL39P62891 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
RPL39P62891 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC3.64□□□□□ -1.83
RPL39P62891 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RPL39P62891 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RPL39P62891 EEF1A1P21-201ENST00000512363 1344 ntBASIC3.64□□□□□ -1.83
RPL39P62891 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.64□□□□□ -1.83
RPL39P62891 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.64□□□□□ -1.83
RPL39P62891 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RPL39P62891 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RPL39P62891 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RPL39P62891 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RPL39P62891 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RPL39P62891 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
RPL39P62891 OR55B1P-203ENST00000641518 2602 ntBASIC3.63□□□□□ -1.83
RPL39P62891 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RPL39P62891 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC3.63□□□□□ -1.83
RPL39P62891 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.63□□□□□ -1.83
RPL39P62891 AP002833.3-201ENST00000625075 2265 ntBASIC3.63□□□□□ -1.83
RPL39P62891 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC3.63□□□□□ -1.83
RPL39P62891 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RPL39P62891 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
RPL39P62891 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RPL39P62891 RNU4-2-201ENST00000365668 141 ntBASIC3.63□□□□□ -1.83
RPL39P62891 MIR105-1-201ENST00000385222 81 ntBASIC3.63□□□□□ -1.83
RPL39P62891 AL359643.1-201ENST00000404109 423 ntBASIC3.63□□□□□ -1.83
RPL39P62891 AL133388.1-201ENST00000404509 287 ntBASIC3.63□□□□□ -1.83
RPL39P62891 OR4K12P-201ENST00000406538 961 ntBASIC3.63□□□□□ -1.83
RPL39P62891 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.63□□□□□ -1.83
RPL39P62891 NAP1L4P2-201ENST00000425958 899 ntBASIC3.63□□□□□ -1.83
RPL39P62891 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC3.63□□□□□ -1.83
RPL39P62891 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC3.63□□□□□ -1.83
RPL39P62891 AL161722.2-201ENST00000434731 981 ntBASIC3.63□□□□□ -1.83
RPL39P62891 GAPDHP25-201ENST00000447061 1001 ntBASIC3.63□□□□□ -1.83
RPL39P62891 CEACAMP11-201ENST00000455211 583 ntBASIC3.63□□□□□ -1.83
RPL39P62891 LDHBP2-201ENST00000456969 1005 ntBASIC3.63□□□□□ -1.83
RPL39P62891 AC091180.1-201ENST00000462104 372 ntBASIC3.63□□□□□ -1.83
RPL39P62891 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC3.63□□□□□ -1.83
RPL39P62891 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC3.63□□□□□ -1.83
RPL39P62891 AC006427.1-201ENST00000514359 712 ntBASIC3.63□□□□□ -1.83
RPL39P62891 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC3.63□□□□□ -1.83
RPL39P62891 RAB30-209ENST00000532548 644 ntTSL 3 BASIC3.63□□□□□ -1.83
RPL39P62891 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC3.63□□□□□ -1.83
RPL39P62891 AC078878.1-201ENST00000539832 958 ntBASIC3.63□□□□□ -1.83
RPL39P62891 YWHABP2-201ENST00000540201 713 ntBASIC3.63□□□□□ -1.83
RPL39P62891 AGGF1P9-201ENST00000561884 913 ntBASIC3.63□□□□□ -1.83
RPL39P62891 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC3.63□□□□□ -1.83
RPL39P62891 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RPL39P62891 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC3.63□□□□□ -1.83
RPL39P62891 AC008814.1-201ENST00000603797 406 ntBASIC3.63□□□□□ -1.83
RPL39P62891 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC3.63□□□□□ -1.83
RPL39P62891 AC139792.1-201ENST00000607051 647 ntBASIC3.63□□□□□ -1.83
RPL39P62891 AC118658.2-201ENST00000618697 459 ntBASIC3.63□□□□□ -1.83
RPL39P62891 CASC19-274ENST00000642018 970 ntBASIC3.63□□□□□ -1.83
RPL39P62891 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
RPL39P62891 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RPL39P62891 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC3.63□□□□□ -1.83
RPL39P62891 AL031123.3-201ENST00000623345 1837 ntBASIC3.63□□□□□ -1.83
RPL39P62891 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RPL39P62891 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms