Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LMO4P61968 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
LMO4P61968 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.57□□□□□ -1.68
LMO4P61968 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC4.57□□□□□ -1.68
LMO4P61968 AC005294.1-201ENST00000355509 281 ntBASIC4.57□□□□□ -1.68
LMO4P61968 RNA5SP326-201ENST00000363209 110 ntBASIC4.57□□□□□ -1.68
LMO4P61968 SNORA16A-201ENST00000384342 137 ntBASIC4.57□□□□□ -1.68
LMO4P61968 AC005042.1-201ENST00000393397 800 ntBASIC4.57□□□□□ -1.68
LMO4P61968 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC4.57□□□□□ -1.68
LMO4P61968 RAB9AP4-201ENST00000415230 609 ntBASIC4.57□□□□□ -1.68
LMO4P61968 AC007394.1-201ENST00000421941 531 ntBASIC4.57□□□□□ -1.68
LMO4P61968 AL354692.1-201ENST00000423044 315 ntBASIC4.57□□□□□ -1.68
LMO4P61968 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.57□□□□□ -1.68
LMO4P61968 TMEM183AP1-205ENST00000432739 290 ntBASIC4.57□□□□□ -1.68
LMO4P61968 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.57□□□□□ -1.68
LMO4P61968 OR52B5P-201ENST00000435337 951 ntBASIC4.57□□□□□ -1.68
LMO4P61968 PTMAP6-201ENST00000439110 327 ntBASIC4.57□□□□□ -1.68
LMO4P61968 XKRYP6-201ENST00000440468 1116 ntBASIC4.57□□□□□ -1.68
LMO4P61968 MTCO3P43-201ENST00000440974 771 ntBASIC4.57□□□□□ -1.68
LMO4P61968 XKRYP3-201ENST00000442113 1116 ntBASIC4.57□□□□□ -1.68
LMO4P61968 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.57□□□□□ -1.68
LMO4P61968 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.57□□□□□ -1.68
LMO4P61968 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.57□□□□□ -1.68
LMO4P61968 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.57□□□□□ -1.68
LMO4P61968 SEPT7P6-201ENST00000469999 1143 ntBASIC4.57□□□□□ -1.68
LMO4P61968 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.57□□□□□ -1.68
LMO4P61968 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.57□□□□□ -1.68
LMO4P61968 ATP5LP5-201ENST00000483050 299 ntBASIC4.57□□□□□ -1.68
LMO4P61968 AC004815.1-201ENST00000484185 331 ntBASIC4.57□□□□□ -1.68
LMO4P61968 PDCL3P4-201ENST00000489621 720 ntBASIC4.57□□□□□ -1.68
LMO4P61968 RN7SL447P-201ENST00000494711 245 ntBASIC4.57□□□□□ -1.68
LMO4P61968 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LMO4P61968 RPEP1-201ENST00000504507 658 ntBASIC4.57□□□□□ -1.68
LMO4P61968 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.57□□□□□ -1.68
LMO4P61968 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.57□□□□□ -1.68
LMO4P61968 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.57□□□□□ -1.68
LMO4P61968 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.57□□□□□ -1.68
LMO4P61968 OR4R2P-201ENST00000530815 597 ntBASIC4.57□□□□□ -1.68
LMO4P61968 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LMO4P61968 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.57□□□□□ -1.68
LMO4P61968 AC004223.2-201ENST00000590309 544 ntBASIC4.57□□□□□ -1.68
LMO4P61968 AC009303.3-201ENST00000591103 736 ntBASIC4.57□□□□□ -1.68
LMO4P61968 BNIP3P27-201ENST00000599991 412 ntBASIC4.57□□□□□ -1.68
LMO4P61968 GMCL1P2-201ENST00000605230 823 ntBASIC4.57□□□□□ -1.68
LMO4P61968 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LMO4P61968 AC104307.1-201ENST00000616142 196 ntBASIC4.57□□□□□ -1.68
LMO4P61968 AC006249.1-201ENST00000621223 471 ntBASIC4.57□□□□□ -1.68
LMO4P61968 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.57□□□□□ -1.68
LMO4P61968 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.57□□□□□ -1.68
LMO4P61968 OR52B5P-202ENST00000641118 1110 ntBASIC4.57□□□□□ -1.68
LMO4P61968 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
LMO4P61968 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
LMO4P61968 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LMO4P61968 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LMO4P61968 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LMO4P61968 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
LMO4P61968 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
LMO4P61968 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.57□□□□□ -1.68
LMO4P61968 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
LMO4P61968 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LMO4P61968 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LMO4P61968 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
LMO4P61968 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LMO4P61968 AC007938.2-201ENST00000604666 2634 ntBASIC4.57□□□□□ -1.68
LMO4P61968 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
LMO4P61968 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LMO4P61968 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LMO4P61968 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.56□□□□□ -1.68
LMO4P61968 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
LMO4P61968 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LMO4P61968 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LMO4P61968 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LMO4P61968 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LMO4P61968 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
LMO4P61968 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
LMO4P61968 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LMO4P61968 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LMO4P61968 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
LMO4P61968 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.56□□□□□ -1.68
LMO4P61968 MIR133B-201ENST00000362210 119 ntBASIC4.56□□□□□ -1.68
LMO4P61968 RNU6-697P-201ENST00000363348 107 ntBASIC4.56□□□□□ -1.68
LMO4P61968 SNORA74A-201ENST00000364089 198 ntBASIC4.56□□□□□ -1.68
LMO4P61968 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LMO4P61968 SNORA70-201ENST00000384436 135 ntBASIC4.56□□□□□ -1.68
LMO4P61968 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
LMO4P61968 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
LMO4P61968 RNA5SP339-201ENST00000390987 122 ntBASIC4.56□□□□□ -1.68
LMO4P61968 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC4.56□□□□□ -1.68
LMO4P61968 RPS26P38-201ENST00000414476 348 ntBASIC4.56□□□□□ -1.68
LMO4P61968 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.56□□□□□ -1.68
LMO4P61968 MTND4P11-201ENST00000417020 1058 ntBASIC4.56□□□□□ -1.68
LMO4P61968 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.56□□□□□ -1.68
LMO4P61968 AL034379.1-201ENST00000423216 253 ntBASIC4.56□□□□□ -1.68
LMO4P61968 PRUNEP1-201ENST00000425846 705 ntBASIC4.56□□□□□ -1.68
LMO4P61968 DSTNP5-201ENST00000427921 523 ntBASIC4.56□□□□□ -1.68
LMO4P61968 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.56□□□□□ -1.68
LMO4P61968 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.56□□□□□ -1.68
LMO4P61968 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.56□□□□□ -1.68
LMO4P61968 GAPDHP58-201ENST00000438477 1006 ntBASIC4.56□□□□□ -1.68
LMO4P61968 AC245047.2-201ENST00000441060 530 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms