Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH12P55289 GLRXP2-201ENST00000555594 321 ntBASIC5.33□□□□□ -1.56
CDH12P55289 YWHAZP1-201ENST00000556286 722 ntBASIC5.33□□□□□ -1.56
CDH12P55289 AC106730.2-201ENST00000566641 540 ntBASIC5.33□□□□□ -1.56
CDH12P55289 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH12P55289 AC138207.8-204ENST00000579588 527 ntBASIC5.33□□□□□ -1.56
CDH12P55289 MIR4502-201ENST00000580432 81 ntBASIC5.33□□□□□ -1.56
CDH12P55289 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CDH12P55289 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH12P55289 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH12P55289 AC125494.2-201ENST00000602431 657 ntBASIC5.33□□□□□ -1.56
CDH12P55289 NANOGP3-201ENST00000605855 286 ntBASIC5.33□□□□□ -1.56
CDH12P55289 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.33□□□□□ -1.56
CDH12P55289 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.33□□□□□ -1.56
CDH12P55289 AC004241.3-201ENST00000611728 517 ntBASIC5.33□□□□□ -1.56
CDH12P55289 AL139099.4-201ENST00000614802 114 ntBASIC5.33□□□□□ -1.56
CDH12P55289 MIR6133-201ENST00000617057 108 ntBASIC5.33□□□□□ -1.56
CDH12P55289 AC109809.1-201ENST00000619665 545 ntBASIC5.33□□□□□ -1.56
CDH12P55289 AL133370.2-201ENST00000619934 439 ntBASIC5.33□□□□□ -1.56
CDH12P55289 AL035661.1-201ENST00000620459 1144 ntBASIC5.33□□□□□ -1.56
CDH12P55289 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH12P55289 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CDH12P55289 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH12P55289 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH12P55289 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH12P55289 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH12P55289 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH12P55289 PARP4P2-201ENST00000446672 3326 ntBASIC5.33□□□□□ -1.56
CDH12P55289 QRSL1P1-201ENST00000400977 1540 ntBASIC5.33□□□□□ -1.56
CDH12P55289 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CDH12P55289 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH12P55289 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH12P55289 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH12P55289 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CDH12P55289 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH12P55289 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH12P55289 AL078595.2-201ENST00000605309 1780 ntBASIC5.32□□□□□ -1.56
CDH12P55289 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH12P55289 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH12P55289 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
CDH12P55289 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CDH12P55289 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CDH12P55289 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CDH12P55289 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH12P55289 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH12P55289 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH12P55289 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDH12P55289 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH12P55289 NPM1P38-201ENST00000403835 865 ntBASIC5.32□□□□□ -1.56
CDH12P55289 RNU6-584P-201ENST00000410350 95 ntBASIC5.32□□□□□ -1.56
CDH12P55289 NIFKP3-201ENST00000417799 865 ntBASIC5.32□□□□□ -1.56
CDH12P55289 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH12P55289 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH12P55289 PNKDP1-201ENST00000435914 430 ntBASIC5.32□□□□□ -1.56
CDH12P55289 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH12P55289 RPL6P30-201ENST00000443382 862 ntBASIC5.32□□□□□ -1.56
CDH12P55289 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH12P55289 AL096829.2-201ENST00000446582 742 ntBASIC5.32□□□□□ -1.56
CDH12P55289 GEMIN2P1-201ENST00000454246 752 ntBASIC5.32□□□□□ -1.56
CDH12P55289 RPS7P6-201ENST00000485777 579 ntBASIC5.32□□□□□ -1.56
CDH12P55289 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH12P55289 AC021087.2-201ENST00000504656 1203 ntBASIC5.32□□□□□ -1.56
CDH12P55289 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH12P55289 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH12P55289 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH12P55289 GTF2IP11-201ENST00000526931 420 ntBASIC5.32□□□□□ -1.56
CDH12P55289 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.32□□□□□ -1.56
CDH12P55289 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH12P55289 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH12P55289 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH12P55289 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH12P55289 RN7SL339P-201ENST00000580597 296 ntBASIC5.32□□□□□ -1.56
CDH12P55289 AC005244.1-201ENST00000582566 339 ntBASIC5.32□□□□□ -1.56
CDH12P55289 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDH12P55289 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDH12P55289 AP000864.1-201ENST00000609424 650 ntBASIC5.32□□□□□ -1.56
CDH12P55289 MIR6809-201ENST00000612189 116 ntBASIC5.32□□□□□ -1.56
CDH12P55289 AC015722.2-201ENST00000622210 551 ntBASIC5.32□□□□□ -1.56
CDH12P55289 AC090617.9-201ENST00000623751 147 ntBASIC5.32□□□□□ -1.56
CDH12P55289 AC073342.3-201ENST00000624211 193 ntBASIC5.32□□□□□ -1.56
CDH12P55289 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH12P55289 FRG1DP-201ENST00000635586 771 ntBASIC5.32□□□□□ -1.56
CDH12P55289 AP000550.3-201ENST00000637734 379 ntBASIC5.32□□□□□ -1.56
CDH12P55289 AL360270.2-201ENST00000562952 5985 ntBASIC5.32□□□□□ -1.56
CDH12P55289 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH12P55289 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CDH12P55289 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH12P55289 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CDH12P55289 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDH12P55289 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH12P55289 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH12P55289 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDH12P55289 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH12P55289 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDH12P55289 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH12P55289 AC117409.1-201ENST00000470499 1310 ntBASIC5.31□□□□□ -1.56
CDH12P55289 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH12P55289 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CDH12P55289 AL132656.3-201ENST00000606384 1595 ntBASIC5.31□□□□□ -1.56
CDH12P55289 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms