Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6□□□□□ -1.45
VCPP55072 VN1R21P-201ENST00000426703 765 ntBASIC6□□□□□ -1.45
VCPP55072 BX276092.6-201ENST00000430476 250 ntBASIC6□□□□□ -1.45
VCPP55072 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
VCPP55072 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6□□□□□ -1.45
VCPP55072 AC006466.1-201ENST00000438721 289 ntBASIC6□□□□□ -1.45
VCPP55072 CEACAMP9-201ENST00000442990 513 ntBASIC6□□□□□ -1.45
VCPP55072 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6□□□□□ -1.45
VCPP55072 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6□□□□□ -1.45
VCPP55072 BX276092.8-201ENST00000455722 250 ntBASIC6□□□□□ -1.45
VCPP55072 MRE11P1-201ENST00000464884 2127 ntBASIC6□□□□□ -1.45
VCPP55072 RN7SL583P-201ENST00000475692 287 ntBASIC6□□□□□ -1.45
VCPP55072 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6□□□□□ -1.45
VCPP55072 PGAM1P13-201ENST00000507497 754 ntBASIC6□□□□□ -1.45
VCPP55072 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6□□□□□ -1.45
VCPP55072 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6□□□□□ -1.45
VCPP55072 AC097486.1-201ENST00000515331 210 ntBASIC6□□□□□ -1.45
VCPP55072 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6□□□□□ -1.45
VCPP55072 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6□□□□□ -1.45
VCPP55072 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6□□□□□ -1.45
VCPP55072 AC015720.2-201ENST00000567709 334 ntBASIC6□□□□□ -1.45
VCPP55072 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6□□□□□ -1.45
VCPP55072 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6□□□□□ -1.45
VCPP55072 NANOGP3-201ENST00000605855 286 ntBASIC6□□□□□ -1.45
VCPP55072 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6□□□□□ -1.45
VCPP55072 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6□□□□□ -1.45
VCPP55072 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6□□□□□ -1.45
VCPP55072 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
VCPP55072 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6□□□□□ -1.45
VCPP55072 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6□□□□□ -1.45
VCPP55072 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VCPP55072 AC125336.1-201ENST00000508893 2827 ntBASIC6□□□□□ -1.45
VCPP55072 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
VCPP55072 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6□□□□□ -1.45
VCPP55072 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.99□□□□□ -1.45
VCPP55072 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
VCPP55072 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.99□□□□□ -1.45
VCPP55072 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
VCPP55072 AC097063.1-201ENST00000426714 1797 ntBASIC5.99□□□□□ -1.45
VCPP55072 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
VCPP55072 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.99□□□□□ -1.45
VCPP55072 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
VCPP55072 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VCPP55072 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.99□□□□□ -1.45
VCPP55072 RNU1-136P-201ENST00000384181 164 ntBASIC5.99□□□□□ -1.45
VCPP55072 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.99□□□□□ -1.45
VCPP55072 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.99□□□□□ -1.45
VCPP55072 AL445213.1-201ENST00000412589 747 ntBASIC5.99□□□□□ -1.45
VCPP55072 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.99□□□□□ -1.45
VCPP55072 RNGTTP1-201ENST00000420965 728 ntBASIC5.99□□□□□ -1.45
VCPP55072 AC005033.1-201ENST00000428904 813 ntBASIC5.99□□□□□ -1.45
VCPP55072 AL022331.1-201ENST00000429025 477 ntBASIC5.99□□□□□ -1.45
VCPP55072 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.99□□□□□ -1.45
VCPP55072 AC091390.1-201ENST00000433904 331 ntBASIC5.99□□□□□ -1.45
VCPP55072 AC099670.2-201ENST00000435130 321 ntBASIC5.99□□□□□ -1.45
VCPP55072 PA2G4P6-201ENST00000438325 1197 ntBASIC5.99□□□□□ -1.45
VCPP55072 AC245047.2-201ENST00000441060 530 ntBASIC5.99□□□□□ -1.45
VCPP55072 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.99□□□□□ -1.45
VCPP55072 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.99□□□□□ -1.45
VCPP55072 RPL7P6-201ENST00000480903 738 ntBASIC5.99□□□□□ -1.45
VCPP55072 EIF1P7-201ENST00000487533 337 ntBASIC5.99□□□□□ -1.45
VCPP55072 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.99□□□□□ -1.45
VCPP55072 SCARNA6.1-201ENST00000516989 238 ntBASIC5.99□□□□□ -1.45
VCPP55072 AC139365.2-201ENST00000517972 253 ntBASIC5.99□□□□□ -1.45
VCPP55072 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.99□□□□□ -1.45
VCPP55072 AP000676.2-201ENST00000529711 301 ntBASIC5.99□□□□□ -1.45
VCPP55072 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.99□□□□□ -1.45
VCPP55072 AC084824.2-201ENST00000548906 345 ntBASIC5.99□□□□□ -1.45
VCPP55072 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.99□□□□□ -1.45
VCPP55072 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.99□□□□□ -1.45
VCPP55072 AF230666.2-201ENST00000602328 725 ntBASIC5.99□□□□□ -1.45
VCPP55072 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VCPP55072 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VCPP55072 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.99□□□□□ -1.45
VCPP55072 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VCPP55072 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VCPP55072 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VCPP55072 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VCPP55072 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VCPP55072 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
VCPP55072 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VCPP55072 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
VCPP55072 TET1P1-201ENST00000426627 2301 ntBASIC5.98□□□□□ -1.45
VCPP55072 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VCPP55072 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
VCPP55072 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.98□□□□□ -1.45
VCPP55072 MIR133A2-201ENST00000347538 102 ntBASIC5.98□□□□□ -1.45
VCPP55072 RNA5SP183-201ENST00000362452 119 ntBASIC5.98□□□□□ -1.45
VCPP55072 AL109941.1-201ENST00000401925 229 ntBASIC5.98□□□□□ -1.45
VCPP55072 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VCPP55072 AL356967.1-201ENST00000406305 431 ntBASIC5.98□□□□□ -1.45
VCPP55072 AL158827.1-201ENST00000416300 391 ntBASIC5.98□□□□□ -1.45
VCPP55072 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.98□□□□□ -1.45
VCPP55072 CYCSP12-201ENST00000437729 300 ntBASIC5.98□□□□□ -1.45
VCPP55072 AC009963.2-201ENST00000453431 138 ntBASIC5.98□□□□□ -1.45
VCPP55072 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.98□□□□□ -1.45
VCPP55072 RPS29P22-201ENST00000472363 168 ntBASIC5.98□□□□□ -1.45
VCPP55072 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.98□□□□□ -1.45
VCPP55072 AC009120.1-201ENST00000493458 473 ntBASIC5.98□□□□□ -1.45
VCPP55072 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms