Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AL391358.1-201ENST00000605342 190 ntBASIC6.45□□□□□ -1.38
NUP98P52948 AC104581.5-201ENST00000624171 7141 ntBASIC6.45□□□□□ -1.38
NUP98P52948 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
NUP98P52948 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
NUP98P52948 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.44□□□□□ -1.38
NUP98P52948 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.44□□□□□ -1.38
NUP98P52948 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
NUP98P52948 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
NUP98P52948 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC6.44□□□□□ -1.38
NUP98P52948 AC006210.2-201ENST00000367074 1545 ntBASIC6.44□□□□□ -1.38
NUP98P52948 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NUP98P52948 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NUP98P52948 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
NUP98P52948 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NUP98P52948 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
NUP98P52948 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.44□□□□□ -1.38
NUP98P52948 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.44□□□□□ -1.38
NUP98P52948 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.44□□□□□ -1.38
NUP98P52948 HMGN2P25-201ENST00000486956 268 ntBASIC6.44□□□□□ -1.38
NUP98P52948 OR8Q1P-201ENST00000526467 655 ntBASIC6.44□□□□□ -1.38
NUP98P52948 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.44□□□□□ -1.38
NUP98P52948 UBE2FP2-201ENST00000566646 462 ntBASIC6.44□□□□□ -1.38
NUP98P52948 AC019322.1-201ENST00000571869 389 ntBASIC6.44□□□□□ -1.38
NUP98P52948 RN7SL690P-201ENST00000582087 240 ntBASIC6.44□□□□□ -1.38
NUP98P52948 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.44□□□□□ -1.38
NUP98P52948 AC011626.1-201ENST00000604710 562 ntBASIC6.44□□□□□ -1.38
NUP98P52948 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.44□□□□□ -1.38
NUP98P52948 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
NUP98P52948 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.44□□□□□ -1.38
NUP98P52948 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.44□□□□□ -1.38
NUP98P52948 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.44□□□□□ -1.38
NUP98P52948 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NUP98P52948 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.44□□□□□ -1.38
NUP98P52948 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NUP98P52948 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NUP98P52948 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NUP98P52948 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.44□□□□□ -1.38
NUP98P52948 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
NUP98P52948 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.43□□□□□ -1.38
NUP98P52948 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NUP98P52948 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.43□□□□□ -1.38
NUP98P52948 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.43□□□□□ -1.38
NUP98P52948 USP9YP9-201ENST00000429406 715 ntBASIC6.43□□□□□ -1.38
NUP98P52948 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.43□□□□□ -1.38
NUP98P52948 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.43□□□□□ -1.38
NUP98P52948 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.43□□□□□ -1.38
NUP98P52948 AC092905.1-201ENST00000467527 949 ntBASIC6.43□□□□□ -1.38
NUP98P52948 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.43□□□□□ -1.38
NUP98P52948 RPS24P16-201ENST00000497294 392 ntBASIC6.43□□□□□ -1.38
NUP98P52948 AC010350.1-201ENST00000504908 231 ntBASIC6.43□□□□□ -1.38
NUP98P52948 RNA5SP392-201ENST00000516905 112 ntBASIC6.43□□□□□ -1.38
NUP98P52948 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.43□□□□□ -1.38
NUP98P52948 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.43□□□□□ -1.38
NUP98P52948 NMNAT1P1-201ENST00000554095 876 ntBASIC6.43□□□□□ -1.38
NUP98P52948 AC011453.2-201ENST00000603737 729 ntBASIC6.43□□□□□ -1.38
NUP98P52948 BNIP3P35-201ENST00000604530 490 ntBASIC6.43□□□□□ -1.38
NUP98P52948 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.43□□□□□ -1.38
NUP98P52948 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.43□□□□□ -1.38
NUP98P52948 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
NUP98P52948 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NUP98P52948 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.43□□□□□ -1.38
NUP98P52948 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NUP98P52948 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
NUP98P52948 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.43□□□□□ -1.38
NUP98P52948 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NUP98P52948 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NUP98P52948 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC6.43□□□□□ -1.38
NUP98P52948 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NUP98P52948 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NUP98P52948 AC136624.1-201ENST00000400791 413 ntBASIC6.43□□□□□ -1.38
NUP98P52948 RNA5SP113-201ENST00000410486 84 ntBASIC6.43□□□□□ -1.38
NUP98P52948 RN7SKP100-201ENST00000411258 284 ntBASIC6.43□□□□□ -1.38
NUP98P52948 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.43□□□□□ -1.38
NUP98P52948 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.43□□□□□ -1.38
NUP98P52948 PSAT1P4-201ENST00000466500 526 ntBASIC6.43□□□□□ -1.38
NUP98P52948 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NUP98P52948 RN7SL346P-201ENST00000491561 294 ntBASIC6.43□□□□□ -1.38
NUP98P52948 RPL23AP72-201ENST00000492447 435 ntBASIC6.43□□□□□ -1.38
NUP98P52948 AC084824.2-201ENST00000548906 345 ntBASIC6.43□□□□□ -1.38
NUP98P52948 EDDM3DP-201ENST00000554692 434 ntBASIC6.43□□□□□ -1.38
NUP98P52948 AC105129.1-201ENST00000560250 297 ntBASIC6.43□□□□□ -1.38
NUP98P52948 AC105254.2-201ENST00000603636 436 ntBASIC6.43□□□□□ -1.38
NUP98P52948 MIR378J-201ENST00000611988 109 ntBASIC6.43□□□□□ -1.38
NUP98P52948 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.43□□□□□ -1.38
NUP98P52948 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.43□□□□□ -1.38
NUP98P52948 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NUP98P52948 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC6.43□□□□□ -1.38
NUP98P52948 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NUP98P52948 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NUP98P52948 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
NUP98P52948 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NUP98P52948 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NUP98P52948 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.42□□□□□ -1.38
NUP98P52948 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.42□□□□□ -1.38
NUP98P52948 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NUP98P52948 SNORA66-201ENST00000384792 133 ntBASIC6.42□□□□□ -1.38
NUP98P52948 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.42□□□□□ -1.38
NUP98P52948 AL049745.1-201ENST00000433953 286 ntBASIC6.42□□□□□ -1.38
NUP98P52948 RN7SL443P-201ENST00000464331 290 ntBASIC6.42□□□□□ -1.38
NUP98P52948 OR51A1P-201ENST00000511110 946 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms