Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SOX2P48431 RN7SL284P-201ENST00000498823 275 ntBASIC5.24□□□□□ -1.57
SOX2P48431 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.24□□□□□ -1.57
SOX2P48431 AC021106.1-201ENST00000509020 1058 ntBASIC5.24□□□□□ -1.57
SOX2P48431 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.24□□□□□ -1.57
SOX2P48431 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.24□□□□□ -1.57
SOX2P48431 UGT2A3P7-201ENST00000510485 734 ntBASIC5.24□□□□□ -1.57
SOX2P48431 KHDC1P1-201ENST00000511053 508 ntBASIC5.24□□□□□ -1.57
SOX2P48431 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.24□□□□□ -1.57
SOX2P48431 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.24□□□□□ -1.57
SOX2P48431 CYCSP25-201ENST00000525280 316 ntBASIC5.24□□□□□ -1.57
SOX2P48431 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SOX2P48431 MRPS36P5-201ENST00000551909 298 ntBASIC5.24□□□□□ -1.57
SOX2P48431 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.24□□□□□ -1.57
SOX2P48431 AL356801.1-201ENST00000559320 294 ntBASIC5.24□□□□□ -1.57
SOX2P48431 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.24□□□□□ -1.57
SOX2P48431 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.24□□□□□ -1.57
SOX2P48431 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.24□□□□□ -1.57
SOX2P48431 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.24□□□□□ -1.57
SOX2P48431 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.24□□□□□ -1.57
SOX2P48431 AC008751.2-201ENST00000597885 980 ntBASIC5.24□□□□□ -1.57
SOX2P48431 DUXAP3-201ENST00000603616 594 ntBASIC5.24□□□□□ -1.57
SOX2P48431 AC019131.2-201ENST00000609071 870 ntBASIC5.24□□□□□ -1.57
SOX2P48431 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.24□□□□□ -1.57
SOX2P48431 AL159169.2-201ENST00000610061 1269 ntBASIC5.24□□□□□ -1.57
SOX2P48431 AC068726.1-201ENST00000610993 341 ntBASIC5.24□□□□□ -1.57
SOX2P48431 PART1_2.1-201ENST00000612397 250 ntBASIC5.24□□□□□ -1.57
SOX2P48431 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SOX2P48431 AL031658.2-201ENST00000616850 651 ntBASIC5.24□□□□□ -1.57
SOX2P48431 AC011330.2-201ENST00000621680 635 ntBASIC5.24□□□□□ -1.57
SOX2P48431 AC004777.1-201ENST00000624317 287 ntBASIC5.24□□□□□ -1.57
SOX2P48431 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SOX2P48431 AC017104.5-201ENST00000637647 639 ntBASIC5.24□□□□□ -1.57
SOX2P48431 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
SOX2P48431 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SOX2P48431 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SOX2P48431 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SOX2P48431 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SOX2P48431 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SOX2P48431 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.23□□□□□ -1.57
SOX2P48431 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SOX2P48431 AC099786.3-201ENST00000565735 1410 ntBASIC5.23□□□□□ -1.57
SOX2P48431 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.23□□□□□ -1.57
SOX2P48431 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SOX2P48431 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SOX2P48431 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SOX2P48431 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SOX2P48431 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SOX2P48431 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SOX2P48431 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.23□□□□□ -1.57
SOX2P48431 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.23□□□□□ -1.57
SOX2P48431 RNU105B-201ENST00000364478 208 ntBASIC5.23□□□□□ -1.57
SOX2P48431 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.23□□□□□ -1.57
SOX2P48431 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SOX2P48431 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SOX2P48431 MYL6P5-201ENST00000412707 459 ntBASIC5.23□□□□□ -1.57
SOX2P48431 RPS7P8-201ENST00000418311 581 ntBASIC5.23□□□□□ -1.57
SOX2P48431 RPA2P2-201ENST00000419698 796 ntBASIC5.23□□□□□ -1.57
SOX2P48431 USP9YP21-201ENST00000420603 432 ntBASIC5.23□□□□□ -1.57
SOX2P48431 AC093084.1-201ENST00000424233 687 ntBASIC5.23□□□□□ -1.57
SOX2P48431 OR6R1P-201ENST00000431838 940 ntBASIC5.23□□□□□ -1.57
SOX2P48431 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SOX2P48431 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.23□□□□□ -1.57
SOX2P48431 AC094019.1-201ENST00000434678 472 ntBASIC5.23□□□□□ -1.57
SOX2P48431 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.23□□□□□ -1.57
SOX2P48431 OR3D1P-201ENST00000438288 955 ntBASIC5.23□□□□□ -1.57
SOX2P48431 PA2G4P6-201ENST00000438325 1197 ntBASIC5.23□□□□□ -1.57
SOX2P48431 SNRPFP2-201ENST00000440710 251 ntBASIC5.23□□□□□ -1.57
SOX2P48431 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.23□□□□□ -1.57
SOX2P48431 RPSAP40-201ENST00000442343 891 ntBASIC5.23□□□□□ -1.57
SOX2P48431 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.23□□□□□ -1.57
SOX2P48431 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.23□□□□□ -1.57
SOX2P48431 REG1CP-206ENST00000447469 496 ntBASIC5.23□□□□□ -1.57
SOX2P48431 AC093166.2-201ENST00000455969 1017 ntBASIC5.23□□□□□ -1.57
SOX2P48431 RPS4XP6-201ENST00000477670 797 ntBASIC5.23□□□□□ -1.57
SOX2P48431 RPL34P33-201ENST00000486062 334 ntBASIC5.23□□□□□ -1.57
SOX2P48431 AC107398.1-201ENST00000486904 505 ntBASIC5.23□□□□□ -1.57
SOX2P48431 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.23□□□□□ -1.57
SOX2P48431 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.23□□□□□ -1.57
SOX2P48431 AC026782.2-201ENST00000510845 636 ntBASIC5.23□□□□□ -1.57
SOX2P48431 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SOX2P48431 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.23□□□□□ -1.57
SOX2P48431 MTATP6P15-201ENST00000527233 835 ntBASIC5.23□□□□□ -1.57
SOX2P48431 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.23□□□□□ -1.57
SOX2P48431 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.23□□□□□ -1.57
SOX2P48431 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.23□□□□□ -1.57
SOX2P48431 OR4U1P-201ENST00000554958 912 ntBASIC5.23□□□□□ -1.57
SOX2P48431 AC007346.2-201ENST00000564816 892 ntBASIC5.23□□□□□ -1.57
SOX2P48431 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.23□□□□□ -1.57
SOX2P48431 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.23□□□□□ -1.57
SOX2P48431 FAM106CP-201ENST00000582212 507 ntBASIC5.23□□□□□ -1.57
SOX2P48431 AC024267.2-201ENST00000582737 417 ntBASIC5.23□□□□□ -1.57
SOX2P48431 AC012254.4-201ENST00000588843 273 ntBASIC5.23□□□□□ -1.57
SOX2P48431 AC060780.2-201ENST00000589047 198 ntBASIC5.23□□□□□ -1.57
SOX2P48431 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.23□□□□□ -1.57
SOX2P48431 AL589765.6-201ENST00000601909 549 ntBASIC5.23□□□□□ -1.57
SOX2P48431 AC025857.2-201ENST00000602711 238 ntBASIC5.23□□□□□ -1.57
SOX2P48431 AL512430.4-201ENST00000603085 613 ntBASIC5.23□□□□□ -1.57
SOX2P48431 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.23□□□□□ -1.57
SOX2P48431 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms