Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL12P48061 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.36□□□□□ -1.55
CXCL12P48061 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL12P48061 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.36□□□□□ -1.55
CXCL12P48061 SNORA70H-201ENST00000383910 135 ntBASIC5.36□□□□□ -1.55
CXCL12P48061 RNU1-136P-201ENST00000384181 164 ntBASIC5.36□□□□□ -1.55
CXCL12P48061 SNORA70J-201ENST00000384182 135 ntBASIC5.36□□□□□ -1.55
CXCL12P48061 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.36□□□□□ -1.55
CXCL12P48061 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.36□□□□□ -1.55
CXCL12P48061 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL12P48061 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.36□□□□□ -1.55
CXCL12P48061 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.36□□□□□ -1.55
CXCL12P48061 AL672167.3-201ENST00000465951 960 ntBASIC5.36□□□□□ -1.55
CXCL12P48061 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.36□□□□□ -1.55
CXCL12P48061 AC008897.1-201ENST00000494006 347 ntBASIC5.36□□□□□ -1.55
CXCL12P48061 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.36□□□□□ -1.55
CXCL12P48061 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.36□□□□□ -1.55
CXCL12P48061 AC008147.3-201ENST00000548666 354 ntBASIC5.36□□□□□ -1.55
CXCL12P48061 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.36□□□□□ -1.55
CXCL12P48061 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.36□□□□□ -1.55
CXCL12P48061 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.36□□□□□ -1.55
CXCL12P48061 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.36□□□□□ -1.55
CXCL12P48061 AC005252.1-201ENST00000604518 1063 ntBASIC5.36□□□□□ -1.55
CXCL12P48061 CYCSP1-201ENST00000604815 315 ntBASIC5.36□□□□□ -1.55
CXCL12P48061 AL023583.1-201ENST00000607518 1143 ntBASIC5.36□□□□□ -1.55
CXCL12P48061 AL161616.1-201ENST00000611867 286 ntBASIC5.36□□□□□ -1.55
CXCL12P48061 AC087385.3-201ENST00000620477 187 ntBASIC5.36□□□□□ -1.55
CXCL12P48061 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CXCL12P48061 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CXCL12P48061 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.36□□□□□ -1.55
CXCL12P48061 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL12P48061 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL12P48061 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL12P48061 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL12P48061 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL12P48061 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL12P48061 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CXCL12P48061 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CXCL12P48061 ZNF402P-201ENST00000404435 3100 ntBASIC5.36□□□□□ -1.55
CXCL12P48061 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
CXCL12P48061 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.35□□□□□ -1.55
CXCL12P48061 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL12P48061 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL12P48061 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL12P48061 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL12P48061 OR4F13P-202ENST00000560066 2054 ntBASIC5.35□□□□□ -1.55
CXCL12P48061 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.35□□□□□ -1.55
CXCL12P48061 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL12P48061 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL12P48061 RNA5SP455-201ENST00000365190 119 ntBASIC5.35□□□□□ -1.55
CXCL12P48061 RPL23AP18-201ENST00000416139 468 ntBASIC5.35□□□□□ -1.55
CXCL12P48061 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.35□□□□□ -1.55
CXCL12P48061 COX6CP17-201ENST00000421389 185 ntBASIC5.35□□□□□ -1.55
CXCL12P48061 OR2AM1P-201ENST00000422137 422 ntBASIC5.35□□□□□ -1.55
CXCL12P48061 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.35□□□□□ -1.55
CXCL12P48061 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.35□□□□□ -1.55
CXCL12P48061 AC011753.3-201ENST00000443436 406 ntBASIC5.35□□□□□ -1.55
CXCL12P48061 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.35□□□□□ -1.55
CXCL12P48061 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.35□□□□□ -1.55
CXCL12P48061 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.35□□□□□ -1.55
CXCL12P48061 RN7SKP260-201ENST00000516907 149 ntBASIC5.35□□□□□ -1.55
CXCL12P48061 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.35□□□□□ -1.55
CXCL12P48061 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.35□□□□□ -1.55
CXCL12P48061 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL12P48061 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.35□□□□□ -1.55
CXCL12P48061 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.35□□□□□ -1.55
CXCL12P48061 AC073575.2-201ENST00000614212 627 ntBASIC5.35□□□□□ -1.55
CXCL12P48061 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL12P48061 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL12P48061 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL12P48061 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL12P48061 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL12P48061 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.35□□□□□ -1.55
CXCL12P48061 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL12P48061 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL12P48061 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.35□□□□□ -1.55
CXCL12P48061 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CXCL12P48061 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
CXCL12P48061 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.34□□□□□ -1.55
CXCL12P48061 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CXCL12P48061 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.34□□□□□ -1.55
CXCL12P48061 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CXCL12P48061 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CXCL12P48061 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CXCL12P48061 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CXCL12P48061 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CXCL12P48061 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CXCL12P48061 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CXCL12P48061 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.34□□□□□ -1.55
CXCL12P48061 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CXCL12P48061 AL356967.1-201ENST00000406305 431 ntBASIC5.34□□□□□ -1.55
CXCL12P48061 RIMKLBP2-201ENST00000424737 654 ntBASIC5.34□□□□□ -1.55
CXCL12P48061 C4BPAP2-201ENST00000428434 478 ntBASIC5.34□□□□□ -1.55
CXCL12P48061 RPL7P56-201ENST00000429441 717 ntBASIC5.34□□□□□ -1.55
CXCL12P48061 PRPF38AP2-201ENST00000438179 851 ntBASIC5.34□□□□□ -1.55
CXCL12P48061 IGBP1P3-201ENST00000447449 1000 ntBASIC5.34□□□□□ -1.55
CXCL12P48061 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.34□□□□□ -1.55
CXCL12P48061 AC104634.1-201ENST00000452720 462 ntBASIC5.34□□□□□ -1.55
CXCL12P48061 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.34□□□□□ -1.55
CXCL12P48061 RPL5P22-201ENST00000480199 884 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms