Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC067773.1-201ENST00000603284 1094 ntBASIC5.9□□□□□ -1.46
SSR1P43307 AL139041.1-201ENST00000605480 610 ntBASIC5.9□□□□□ -1.46
SSR1P43307 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.9□□□□□ -1.46
SSR1P43307 AC087565.3-203ENST00000641018 837 ntBASIC5.9□□□□□ -1.46
SSR1P43307 LINC01963-201ENST00000562038 3148 ntBASIC5.9□□□□□ -1.46
SSR1P43307 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.9□□□□□ -1.46
SSR1P43307 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SSR1P43307 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
SSR1P43307 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SSR1P43307 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SSR1P43307 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SSR1P43307 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.89□□□□□ -1.47
SSR1P43307 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SSR1P43307 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSR1P43307 AL450326.2-201ENST00000421913 1962 ntBASIC5.89□□□□□ -1.47
SSR1P43307 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SSR1P43307 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSR1P43307 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.89□□□□□ -1.47
SSR1P43307 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSR1P43307 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSR1P43307 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.89□□□□□ -1.47
SSR1P43307 SNORA64.1-201ENST00000362600 132 ntBASIC5.89□□□□□ -1.47
SSR1P43307 VN1R12P-201ENST00000403778 876 ntBASIC5.89□□□□□ -1.47
SSR1P43307 AL512430.2-201ENST00000406786 339 ntBASIC5.89□□□□□ -1.47
SSR1P43307 AL133482.1-201ENST00000415988 498 ntBASIC5.89□□□□□ -1.47
SSR1P43307 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.89□□□□□ -1.47
SSR1P43307 NANOGP9-201ENST00000439890 892 ntBASIC5.89□□□□□ -1.47
SSR1P43307 AC023271.1-201ENST00000445936 1090 ntBASIC5.89□□□□□ -1.47
SSR1P43307 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.89□□□□□ -1.47
SSR1P43307 ATP5LP5-201ENST00000483050 299 ntBASIC5.89□□□□□ -1.47
SSR1P43307 NENFP3-201ENST00000503735 313 ntBASIC5.89□□□□□ -1.47
SSR1P43307 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.89□□□□□ -1.47
SSR1P43307 IGLV3-24-201ENST00000517477 197 ntBASIC5.89□□□□□ -1.47
SSR1P43307 AC018442.3-201ENST00000523025 183 ntBASIC5.89□□□□□ -1.47
SSR1P43307 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.89□□□□□ -1.47
SSR1P43307 AC122688.1-201ENST00000541494 223 ntBASIC5.89□□□□□ -1.47
SSR1P43307 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.89□□□□□ -1.47
SSR1P43307 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.89□□□□□ -1.47
SSR1P43307 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSR1P43307 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.89□□□□□ -1.47
SSR1P43307 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.89□□□□□ -1.47
SSR1P43307 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.89□□□□□ -1.47
SSR1P43307 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.89□□□□□ -1.47
SSR1P43307 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.89□□□□□ -1.47
SSR1P43307 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.89□□□□□ -1.47
SSR1P43307 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSR1P43307 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
SSR1P43307 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSR1P43307 AC007938.2-201ENST00000604666 2634 ntBASIC5.89□□□□□ -1.47
SSR1P43307 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSR1P43307 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.89□□□□□ -1.47
SSR1P43307 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSR1P43307 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSR1P43307 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
SSR1P43307 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSR1P43307 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSR1P43307 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.88□□□□□ -1.47
SSR1P43307 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSR1P43307 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSR1P43307 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSR1P43307 U3.7-201ENST00000363668 216 ntBASIC5.88□□□□□ -1.47
SSR1P43307 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SSR1P43307 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.88□□□□□ -1.47
SSR1P43307 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.88□□□□□ -1.47
SSR1P43307 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.88□□□□□ -1.47
SSR1P43307 CTSL3P-202ENST00000412179 788 ntBASIC5.88□□□□□ -1.47
SSR1P43307 AC073136.2-201ENST00000417282 849 ntBASIC5.88□□□□□ -1.47
SSR1P43307 RNF10P1-201ENST00000418589 369 ntBASIC5.88□□□□□ -1.47
SSR1P43307 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.88□□□□□ -1.47
SSR1P43307 RBMY2TP-201ENST00000451162 947 ntBASIC5.88□□□□□ -1.47
SSR1P43307 AL359839.1-201ENST00000451975 1160 ntBASIC5.88□□□□□ -1.47
SSR1P43307 SNORD125-201ENST00000459538 96 ntBASIC5.88□□□□□ -1.47
SSR1P43307 MRE11P1-201ENST00000464884 2127 ntBASIC5.88□□□□□ -1.47
SSR1P43307 AC087672.1-201ENST00000479876 766 ntBASIC5.88□□□□□ -1.47
SSR1P43307 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.88□□□□□ -1.47
SSR1P43307 HMGB1P42-201ENST00000532126 553 ntBASIC5.88□□□□□ -1.47
SSR1P43307 OR5AM1P-201ENST00000532136 1032 ntBASIC5.88□□□□□ -1.47
SSR1P43307 HSPE1P2-201ENST00000554777 306 ntBASIC5.88□□□□□ -1.47
SSR1P43307 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.88□□□□□ -1.47
SSR1P43307 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.88□□□□□ -1.47
SSR1P43307 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.88□□□□□ -1.47
SSR1P43307 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SSR1P43307 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.88□□□□□ -1.47
SSR1P43307 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.88□□□□□ -1.47
SSR1P43307 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.88□□□□□ -1.47
SSR1P43307 FO681491.1-202ENST00000623392 737 ntBASIC5.88□□□□□ -1.47
SSR1P43307 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SSR1P43307 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
SSR1P43307 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SSR1P43307 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.88□□□□□ -1.47
SSR1P43307 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSR1P43307 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSR1P43307 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSR1P43307 AC107027.3-201ENST00000565095 3473 ntBASIC5.88□□□□□ -1.47
SSR1P43307 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSR1P43307 MT-RNR2-201ENST00000387347 1559 ntBASIC5.88□□□□□ -1.47
SSR1P43307 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.88□□□□□ -1.47
SSR1P43307 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSR1P43307 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SSR1P43307 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms