Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RFC4P35249 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
RFC4P35249 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RFC4P35249 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
RFC4P35249 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RFC4P35249 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RFC4P35249 NLRP3P1-201ENST00000622303 1785 ntBASIC6.75□□□□□ -1.33
RFC4P35249 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.75□□□□□ -1.33
RFC4P35249 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
RFC4P35249 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
RFC4P35249 RNA5SP455-201ENST00000365190 119 ntBASIC6.75□□□□□ -1.33
RFC4P35249 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
RFC4P35249 RPS4XP9-201ENST00000405151 780 ntBASIC6.75□□□□□ -1.33
RFC4P35249 OR2AM1P-201ENST00000422137 422 ntBASIC6.75□□□□□ -1.33
RFC4P35249 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.75□□□□□ -1.33
RFC4P35249 AL590399.4-201ENST00000436561 601 ntBASIC6.75□□□□□ -1.33
RFC4P35249 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.75□□□□□ -1.33
RFC4P35249 AL138878.2-201ENST00000440581 1241 ntBASIC6.75□□□□□ -1.33
RFC4P35249 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.75□□□□□ -1.33
RFC4P35249 RPL12P39-201ENST00000455456 496 ntBASIC6.75□□□□□ -1.33
RFC4P35249 AL672167.3-201ENST00000465951 960 ntBASIC6.75□□□□□ -1.33
RFC4P35249 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
RFC4P35249 RPL5P22-201ENST00000480199 884 ntBASIC6.75□□□□□ -1.33
RFC4P35249 RN7SL459P-201ENST00000481078 302 ntBASIC6.75□□□□□ -1.33
RFC4P35249 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RFC4P35249 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.75□□□□□ -1.33
RFC4P35249 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.75□□□□□ -1.33
RFC4P35249 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.75□□□□□ -1.33
RFC4P35249 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.75□□□□□ -1.33
RFC4P35249 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.75□□□□□ -1.33
RFC4P35249 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RFC4P35249 AL360270.2-201ENST00000562952 5985 ntBASIC6.75□□□□□ -1.33
RFC4P35249 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RFC4P35249 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RFC4P35249 OR4F13P-202ENST00000560066 2054 ntBASIC6.75□□□□□ -1.33
RFC4P35249 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
RFC4P35249 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RFC4P35249 AC090220.1-201ENST00000593078 1699 ntBASIC6.74□□□□□ -1.33
RFC4P35249 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
RFC4P35249 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RFC4P35249 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RFC4P35249 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RFC4P35249 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
RFC4P35249 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.74□□□□□ -1.33
RFC4P35249 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.74□□□□□ -1.33
RFC4P35249 GAPDHP15-201ENST00000398586 975 ntBASIC6.74□□□□□ -1.33
RFC4P35249 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.74□□□□□ -1.33
RFC4P35249 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
RFC4P35249 RPL7P56-201ENST00000429441 717 ntBASIC6.74□□□□□ -1.33
RFC4P35249 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.74□□□□□ -1.33
RFC4P35249 AC011753.3-201ENST00000443436 406 ntBASIC6.74□□□□□ -1.33
RFC4P35249 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.74□□□□□ -1.33
RFC4P35249 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.74□□□□□ -1.33
RFC4P35249 PDCL3P4-201ENST00000489621 720 ntBASIC6.74□□□□□ -1.33
RFC4P35249 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RFC4P35249 AC234771.5-201ENST00000600161 514 ntBASIC6.74□□□□□ -1.33
RFC4P35249 AL133406.3-201ENST00000606817 541 ntBASIC6.74□□□□□ -1.33
RFC4P35249 AC005899.7-201ENST00000618199 588 ntBASIC6.74□□□□□ -1.33
RFC4P35249 AC093829.1-201ENST00000506662 1618 ntBASIC6.74□□□□□ -1.33
RFC4P35249 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
RFC4P35249 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.74□□□□□ -1.33
RFC4P35249 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
RFC4P35249 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.74□□□□□ -1.33
RFC4P35249 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
RFC4P35249 IRF5P1-201ENST00000504852 2164 ntBASIC6.74□□□□□ -1.33
RFC4P35249 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RFC4P35249 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFC4P35249 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFC4P35249 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
RFC4P35249 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFC4P35249 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFC4P35249 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFC4P35249 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
RFC4P35249 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.73□□□□□ -1.33
RFC4P35249 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFC4P35249 RIMKLBP2-201ENST00000424737 654 ntBASIC6.73□□□□□ -1.33
RFC4P35249 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.73□□□□□ -1.33
RFC4P35249 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.73□□□□□ -1.33
RFC4P35249 AC073072.2-201ENST00000447425 348 ntBASIC6.73□□□□□ -1.33
RFC4P35249 RN7SL423P-201ENST00000486202 304 ntBASIC6.73□□□□□ -1.33
RFC4P35249 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.73□□□□□ -1.33
RFC4P35249 GTF2IP11-201ENST00000526931 420 ntBASIC6.73□□□□□ -1.33
RFC4P35249 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFC4P35249 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFC4P35249 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.73□□□□□ -1.33
RFC4P35249 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFC4P35249 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFC4P35249 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFC4P35249 AC008745.1-201ENST00000604064 271 ntBASIC6.73□□□□□ -1.33
RFC4P35249 AC005252.1-201ENST00000604518 1063 ntBASIC6.73□□□□□ -1.33
RFC4P35249 AL161616.1-201ENST00000611867 286 ntBASIC6.73□□□□□ -1.33
RFC4P35249 AC073575.2-201ENST00000614212 627 ntBASIC6.73□□□□□ -1.33
RFC4P35249 AL157762.1-201ENST00000619612 415 ntBASIC6.73□□□□□ -1.33
RFC4P35249 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RFC4P35249 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFC4P35249 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RFC4P35249 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
RFC4P35249 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.73□□□□□ -1.33
RFC4P35249 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.73□□□□□ -1.33
RFC4P35249 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms