Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXA13P31271 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXA13P31271 BCORP1-203ENST00000513194 5093 ntBASIC6.15□□□□□ -1.42
HOXA13P31271 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXA13P31271 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
HOXA13P31271 RPL23P2-201ENST00000320371 421 ntBASIC6.15□□□□□ -1.42
HOXA13P31271 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HOXA13P31271 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HOXA13P31271 RNU1-19P-201ENST00000363306 165 ntBASIC6.15□□□□□ -1.42
HOXA13P31271 SNORD56.6-201ENST00000384569 71 ntBASIC6.15□□□□□ -1.42
HOXA13P31271 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXA13P31271 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXA13P31271 BRWD1P3-201ENST00000428816 390 ntBASIC6.15□□□□□ -1.42
HOXA13P31271 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXA13P31271 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXA13P31271 AL451063.1-201ENST00000450164 1133 ntBASIC6.15□□□□□ -1.42
HOXA13P31271 RPS18P6-201ENST00000476880 458 ntBASIC6.15□□□□□ -1.42
HOXA13P31271 AC058823.1-201ENST00000485315 474 ntBASIC6.15□□□□□ -1.42
HOXA13P31271 AC015864.1-201ENST00000496512 544 ntBASIC6.15□□□□□ -1.42
HOXA13P31271 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXA13P31271 RNA5SP373-201ENST00000517271 95 ntBASIC6.15□□□□□ -1.42
HOXA13P31271 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.15□□□□□ -1.42
HOXA13P31271 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXA13P31271 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXA13P31271 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXA13P31271 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXA13P31271 NMNAT1P5-201ENST00000559657 841 ntBASIC6.15□□□□□ -1.42
HOXA13P31271 AC018558.5-201ENST00000565840 952 ntBASIC6.15□□□□□ -1.42
HOXA13P31271 AC005341.1-201ENST00000571086 708 ntBASIC6.15□□□□□ -1.42
HOXA13P31271 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXA13P31271 AC211433.2-201ENST00000608433 387 ntBASIC6.15□□□□□ -1.42
HOXA13P31271 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
HOXA13P31271 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
HOXA13P31271 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HOXA13P31271 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.15□□□□□ -1.43
HOXA13P31271 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.15□□□□□ -1.43
HOXA13P31271 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
HOXA13P31271 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HOXA13P31271 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.15□□□□□ -1.43
HOXA13P31271 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HOXA13P31271 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
HOXA13P31271 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HOXA13P31271 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.15□□□□□ -1.43
HOXA13P31271 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HOXA13P31271 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
HOXA13P31271 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA13P31271 AC015799.1-201ENST00000622996 3122 ntBASIC6.14□□□□□ -1.43
HOXA13P31271 AL359715.3-201ENST00000569267 2123 ntBASIC6.14□□□□□ -1.43
HOXA13P31271 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA13P31271 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXA13P31271 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
HOXA13P31271 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HOXA13P31271 RNU1-43P-201ENST00000365052 165 ntBASIC6.14□□□□□ -1.43
HOXA13P31271 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXA13P31271 MIR105-2-201ENST00000385083 81 ntBASIC6.14□□□□□ -1.43
HOXA13P31271 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXA13P31271 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXA13P31271 AC017078.1-201ENST00000416146 368 ntBASIC6.14□□□□□ -1.43
HOXA13P31271 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXA13P31271 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXA13P31271 RPL12P17-201ENST00000432393 498 ntBASIC6.14□□□□□ -1.43
HOXA13P31271 PTMAP6-201ENST00000439110 327 ntBASIC6.14□□□□□ -1.43
HOXA13P31271 GAPDHP25-201ENST00000447061 1001 ntBASIC6.14□□□□□ -1.43
HOXA13P31271 AC104634.1-201ENST00000452720 462 ntBASIC6.14□□□□□ -1.43
HOXA13P31271 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXA13P31271 C1DP3-201ENST00000455013 423 ntBASIC6.14□□□□□ -1.43
HOXA13P31271 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXA13P31271 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXA13P31271 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXA13P31271 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.14□□□□□ -1.43
HOXA13P31271 HAUS8P1-201ENST00000549005 542 ntBASIC6.14□□□□□ -1.43
HOXA13P31271 AC044860.2-201ENST00000561005 179 ntBASIC6.14□□□□□ -1.43
HOXA13P31271 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA13P31271 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXA13P31271 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA13P31271 AC003973.3-201ENST00000624863 2822 ntBASIC6.14□□□□□ -1.43
HOXA13P31271 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA13P31271 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXA13P31271 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA13P31271 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
HOXA13P31271 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
HOXA13P31271 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA13P31271 AP000547.3-204ENST00000588548 2523 ntBASIC6.14□□□□□ -1.43
HOXA13P31271 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HOXA13P31271 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXA13P31271 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HOXA13P31271 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXA13P31271 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXA13P31271 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXA13P31271 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
HOXA13P31271 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
HOXA13P31271 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXA13P31271 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HOXA13P31271 U3.28-201ENST00000391249 210 ntBASIC6.13□□□□□ -1.43
HOXA13P31271 DBIP1-201ENST00000401435 260 ntBASIC6.13□□□□□ -1.43
HOXA13P31271 DUTP5-201ENST00000406790 469 ntBASIC6.13□□□□□ -1.43
HOXA13P31271 RNA5SP487-201ENST00000410186 122 ntBASIC6.13□□□□□ -1.43
HOXA13P31271 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HOXA13P31271 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXA13P31271 AC073465.2-201ENST00000440938 498 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms