Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DMBP28068 HMGB1P20-201ENST00000402555 677 ntBASIC4.16□□□□□ -1.74
HLA-DMBP28068 AC002524.1-201ENST00000411687 547 ntBASIC4.16□□□□□ -1.74
HLA-DMBP28068 HYALP1-201ENST00000417674 1279 ntBASIC4.16□□□□□ -1.74
HLA-DMBP28068 AL513325.1-201ENST00000417716 1034 ntBASIC4.16□□□□□ -1.74
HLA-DMBP28068 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DMBP28068 AL022331.1-201ENST00000429025 477 ntBASIC4.16□□□□□ -1.74
HLA-DMBP28068 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DMBP28068 AC090589.1-201ENST00000473109 362 ntBASIC4.16□□□□□ -1.74
HLA-DMBP28068 AC087672.1-201ENST00000479876 766 ntBASIC4.16□□□□□ -1.74
HLA-DMBP28068 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DMBP28068 COX6B1P2-201ENST00000489624 230 ntBASIC4.16□□□□□ -1.74
HLA-DMBP28068 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DMBP28068 IGBP1P4-201ENST00000503202 879 ntBASIC4.16□□□□□ -1.74
HLA-DMBP28068 AC021193.1-201ENST00000511607 420 ntBASIC4.16□□□□□ -1.74
HLA-DMBP28068 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DMBP28068 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.16□□□□□ -1.74
HLA-DMBP28068 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DMBP28068 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DMBP28068 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DMBP28068 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HLA-DMBP28068 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HLA-DMBP28068 AC004477.3-201ENST00000614061 590 ntBASIC4.16□□□□□ -1.74
HLA-DMBP28068 RN7SL544P-201ENST00000617232 284 ntBASIC4.16□□□□□ -1.74
HLA-DMBP28068 RN7SL763P-201ENST00000620922 284 ntBASIC4.16□□□□□ -1.74
HLA-DMBP28068 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HLA-DMBP28068 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DMBP28068 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DMBP28068 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DMBP28068 AL022322.2-201ENST00000624072 20397 ntBASIC4.16□□□□□ -1.74
HLA-DMBP28068 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DMBP28068 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DMBP28068 AC007342.5-201ENST00000571340 2142 ntBASIC4.16□□□□□ -1.74
HLA-DMBP28068 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DMBP28068 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DMBP28068 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DMBP28068 AC100757.1-201ENST00000616872 1835 ntBASIC4.16□□□□□ -1.74
HLA-DMBP28068 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
HLA-DMBP28068 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
HLA-DMBP28068 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DMBP28068 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DMBP28068 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DMBP28068 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DMBP28068 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
HLA-DMBP28068 MTCO1P11-201ENST00000429111 1528 ntBASIC4.16□□□□□ -1.74
HLA-DMBP28068 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DMBP28068 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
HLA-DMBP28068 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.15□□□□□ -1.74
HLA-DMBP28068 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DMBP28068 AC027279.1-201ENST00000568885 4284 ntBASIC4.15□□□□□ -1.74
HLA-DMBP28068 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DMBP28068 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DMBP28068 AC083899.1-201ENST00000454465 3819 ntBASIC4.15□□□□□ -1.74
HLA-DMBP28068 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.15□□□□□ -1.74
HLA-DMBP28068 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DMBP28068 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DMBP28068 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
HLA-DMBP28068 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DMBP28068 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.74
HLA-DMBP28068 AC092376.2-201ENST00000622621 4116 ntBASIC4.15□□□□□ -1.74
HLA-DMBP28068 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DMBP28068 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DMBP28068 RN7SKP74-201ENST00000362849 309 ntBASIC4.15□□□□□ -1.75
HLA-DMBP28068 RNA5SP394-201ENST00000364216 119 ntBASIC4.15□□□□□ -1.75
HLA-DMBP28068 SETP15-201ENST00000412724 337 ntBASIC4.15□□□□□ -1.75
HLA-DMBP28068 OR6C64P-201ENST00000419708 825 ntBASIC4.15□□□□□ -1.75
HLA-DMBP28068 AC007161.1-204ENST00000423039 460 ntBASIC4.15□□□□□ -1.75
HLA-DMBP28068 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DMBP28068 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.15□□□□□ -1.75
HLA-DMBP28068 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.15□□□□□ -1.75
HLA-DMBP28068 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.15□□□□□ -1.75
HLA-DMBP28068 LRRC37A14P-201ENST00000452297 462 ntBASIC4.15□□□□□ -1.75
HLA-DMBP28068 PSAT1P4-201ENST00000466500 526 ntBASIC4.15□□□□□ -1.75
HLA-DMBP28068 RPSAP39-201ENST00000467439 883 ntBASIC4.15□□□□□ -1.75
HLA-DMBP28068 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
HLA-DMBP28068 RPS3AP15-201ENST00000483874 781 ntBASIC4.15□□□□□ -1.75
HLA-DMBP28068 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.15□□□□□ -1.75
HLA-DMBP28068 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DMBP28068 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DMBP28068 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DMBP28068 RPL7L1P4-201ENST00000513004 707 ntBASIC4.15□□□□□ -1.75
HLA-DMBP28068 HMGN1P9-201ENST00000515212 298 ntBASIC4.15□□□□□ -1.75
HLA-DMBP28068 AC092709.1-201ENST00000521355 1045 ntBASIC4.15□□□□□ -1.75
HLA-DMBP28068 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.15□□□□□ -1.75
HLA-DMBP28068 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.15□□□□□ -1.75
HLA-DMBP28068 OR8A2P-201ENST00000528631 952 ntBASIC4.15□□□□□ -1.75
HLA-DMBP28068 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DMBP28068 AC022404.1-201ENST00000555320 273 ntBASIC4.15□□□□□ -1.75
HLA-DMBP28068 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DMBP28068 AC010547.6-201ENST00000571789 193 ntBASIC4.15□□□□□ -1.75
HLA-DMBP28068 SNORD95-201ENST00000579879 68 ntBASIC4.15□□□□□ -1.75
HLA-DMBP28068 H3F3BP2-201ENST00000583907 357 ntBASIC4.15□□□□□ -1.75
HLA-DMBP28068 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DMBP28068 AL049767.1-202ENST00000637826 242 ntBASIC4.15□□□□□ -1.75
HLA-DMBP28068 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DMBP28068 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DMBP28068 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DMBP28068 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DMBP28068 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
HLA-DMBP28068 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms