Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC7.64□□□□□ -1.19
VARSP26640 EIF3KP1-201ENST00000513279 656 ntBASIC7.64□□□□□ -1.19
VARSP26640 NPM1P21-201ENST00000513394 762 ntBASIC7.64□□□□□ -1.19
VARSP26640 RNU6-794P-201ENST00000517261 64 ntBASIC7.64□□□□□ -1.19
VARSP26640 IGJP1-201ENST00000522682 475 ntBASIC7.64□□□□□ -1.19
VARSP26640 GZMB-205ENST00000526004 819 ntTSL 3 BASIC7.64□□□□□ -1.19
VARSP26640 RGS5-218ENST00000526176 574 ntTSL 4 BASIC7.64□□□□□ -1.19
VARSP26640 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.64□□□□□ -1.19
VARSP26640 AP003034.1-201ENST00000534621 422 ntBASIC7.64□□□□□ -1.19
VARSP26640 ELOCP31-201ENST00000540463 467 ntBASIC7.64□□□□□ -1.19
VARSP26640 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC7.64□□□□□ -1.19
VARSP26640 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC7.64□□□□□ -1.19
VARSP26640 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
VARSP26640 MIR5010-201ENST00000582846 120 ntBASIC7.64□□□□□ -1.19
VARSP26640 BNIP3P23-201ENST00000599655 511 ntBASIC7.64□□□□□ -1.19
VARSP26640 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.64□□□□□ -1.19
VARSP26640 AL391646.1-201ENST00000603860 190 ntBASIC7.64□□□□□ -1.19
VARSP26640 AC113139.1-201ENST00000605049 239 ntBASIC7.64□□□□□ -1.19
VARSP26640 PFN1P2-202ENST00000621347 397 ntBASIC7.64□□□□□ -1.19
VARSP26640 AC130448.2-201ENST00000624082 374 ntBASIC7.64□□□□□ -1.19
VARSP26640 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.64□□□□□ -1.19
VARSP26640 AC022743.1-201ENST00000624990 664 ntBASIC7.64□□□□□ -1.19
VARSP26640 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 AC119674.1-207ENST00000641355 633 ntBASIC7.64□□□□□ -1.19
VARSP26640 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC7.64□□□□□ -1.19
VARSP26640 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.64□□□□□ -1.19
VARSP26640 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 CTAGE11P-201ENST00000451540 2353 ntBASIC7.64□□□□□ -1.19
VARSP26640 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
VARSP26640 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
VARSP26640 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC7.64□□□□□ -1.19
VARSP26640 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
VARSP26640 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
VARSP26640 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.64□□□□□ -1.19
VARSP26640 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
VARSP26640 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
VARSP26640 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
VARSP26640 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
VARSP26640 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
VARSP26640 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
VARSP26640 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
VARSP26640 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
VARSP26640 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
VARSP26640 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
VARSP26640 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
VARSP26640 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC7.63□□□□□ -1.19
VARSP26640 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
VARSP26640 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.63□□□□□ -1.19
VARSP26640 AC020904.2-202ENST00000614660 1401 ntBASIC7.63□□□□□ -1.19
VARSP26640 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
VARSP26640 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
VARSP26640 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
VARSP26640 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
VARSP26640 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC7.63□□□□□ -1.19
VARSP26640 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
VARSP26640 OR52B1P-201ENST00000316506 909 ntBASIC7.63□□□□□ -1.19
VARSP26640 RNA5SP161-201ENST00000363871 115 ntBASIC7.63□□□□□ -1.19
VARSP26640 Y_RNA.202-201ENST00000364083 110 ntBASIC7.63□□□□□ -1.19
VARSP26640 FHL1-203ENST00000370676 833 ntTSL 5 BASIC7.63□□□□□ -1.19
VARSP26640 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC7.63□□□□□ -1.19
VARSP26640 AMELY-202ENST00000383036 621 ntTSL 5 BASIC7.63□□□□□ -1.19
VARSP26640 RNU6-196P-201ENST00000384315 107 ntBASIC7.63□□□□□ -1.19
VARSP26640 Y_RNA.481-201ENST00000384373 102 ntBASIC7.63□□□□□ -1.19
VARSP26640 U8.14-201ENST00000390843 143 ntBASIC7.63□□□□□ -1.19
VARSP26640 RPL23AP47-201ENST00000408017 460 ntBASIC7.63□□□□□ -1.19
VARSP26640 RNU6-77P-201ENST00000410554 91 ntBASIC7.63□□□□□ -1.19
VARSP26640 RN7SKP119-201ENST00000410753 273 ntBASIC7.63□□□□□ -1.19
VARSP26640 RNU6-195P-201ENST00000411352 109 ntBASIC7.63□□□□□ -1.19
VARSP26640 OR9R1P-201ENST00000412200 877 ntBASIC7.63□□□□□ -1.19
VARSP26640 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.63□□□□□ -1.19
VARSP26640 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC7.63□□□□□ -1.19
VARSP26640 EIF1P3-201ENST00000423841 334 ntBASIC7.63□□□□□ -1.19
VARSP26640 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC7.63□□□□□ -1.19
VARSP26640 AC236972.2-201ENST00000434979 310 ntBASIC7.63□□□□□ -1.19
VARSP26640 AC009961.2-201ENST00000435771 251 ntBASIC7.63□□□□□ -1.19
VARSP26640 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
VARSP26640 AC123904.1-201ENST00000441072 368 ntBASIC7.63□□□□□ -1.19
VARSP26640 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.63□□□□□ -1.19
VARSP26640 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC7.63□□□□□ -1.19
VARSP26640 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.63□□□□□ -1.19
VARSP26640 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC7.63□□□□□ -1.19
VARSP26640 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
VARSP26640 RN7SL705P-201ENST00000481678 294 ntBASIC7.63□□□□□ -1.19
VARSP26640 TAF8-207ENST00000482432 556 ntTSL 2 BASIC7.63□□□□□ -1.19
VARSP26640 AL449212.1-201ENST00000499853 517 ntBASIC7.63□□□□□ -1.19
VARSP26640 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC7.63□□□□□ -1.19
VARSP26640 AC097460.2-201ENST00000511857 741 ntBASIC7.63□□□□□ -1.19
VARSP26640 AC026782.1-201ENST00000512952 449 ntBASIC7.63□□□□□ -1.19
VARSP26640 RNU6-416P-201ENST00000516265 103 ntBASIC7.63□□□□□ -1.19
VARSP26640 RNU7-30P-201ENST00000516835 62 ntBASIC7.63□□□□□ -1.19
VARSP26640 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC7.63□□□□□ -1.19
VARSP26640 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC7.63□□□□□ -1.19
VARSP26640 IGHV7-40-201ENST00000520963 296 ntBASIC7.63□□□□□ -1.19
VARSP26640 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC7.63□□□□□ -1.19
VARSP26640 AC008429.2-201ENST00000523057 864 ntBASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms