Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC7.44□□□□□ -1.22
LIG1P18858 AC008147.3-201ENST00000548666 354 ntBASIC7.44□□□□□ -1.22
LIG1P18858 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LIG1P18858 ACTR3BP3-201ENST00000565577 979 ntBASIC7.44□□□□□ -1.22
LIG1P18858 GARSP1-201ENST00000570895 719 ntBASIC7.44□□□□□ -1.22
LIG1P18858 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
LIG1P18858 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC7.44□□□□□ -1.22
LIG1P18858 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC7.44□□□□□ -1.22
LIG1P18858 AL163642.2-201ENST00000604722 1019 ntBASIC7.44□□□□□ -1.22
LIG1P18858 AP004372.1-201ENST00000604842 844 ntBASIC7.44□□□□□ -1.22
LIG1P18858 AC073137.1-201ENST00000605636 634 ntBASIC7.44□□□□□ -1.22
LIG1P18858 NQO2-209ENST00000606474 470 ntTSL 3 BASIC7.44□□□□□ -1.22
LIG1P18858 MIR6885-201ENST00000612241 66 ntBASIC7.44□□□□□ -1.22
LIG1P18858 AC024255.1-201ENST00000614376 102 ntBASIC7.44□□□□□ -1.22
LIG1P18858 AC015804.1-201ENST00000622935 435 ntBASIC7.44□□□□□ -1.22
LIG1P18858 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC7.44□□□□□ -1.22
LIG1P18858 AC007603.3-201ENST00000636915 979 ntBASIC7.44□□□□□ -1.22
LIG1P18858 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
LIG1P18858 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LIG1P18858 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.44□□□□□ -1.22
LIG1P18858 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
LIG1P18858 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.44□□□□□ -1.22
LIG1P18858 OR10AB1P-202ENST00000641219 1686 ntBASIC7.44□□□□□ -1.22
LIG1P18858 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
LIG1P18858 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LIG1P18858 FANCD2P2-201ENST00000437591 1400 ntBASIC7.44□□□□□ -1.22
LIG1P18858 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LIG1P18858 AC093909.5-201ENST00000621839 1799 ntBASIC7.43□□□□□ -1.22
LIG1P18858 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.43□□□□□ -1.22
LIG1P18858 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.43□□□□□ -1.22
LIG1P18858 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
LIG1P18858 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.43□□□□□ -1.22
LIG1P18858 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LIG1P18858 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.43□□□□□ -1.22
LIG1P18858 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.43□□□□□ -1.22
LIG1P18858 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LIG1P18858 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC7.43□□□□□ -1.22
LIG1P18858 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
LIG1P18858 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
LIG1P18858 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LIG1P18858 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LIG1P18858 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
LIG1P18858 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
LIG1P18858 UBE2Q2P1-202ENST00000354771 883 ntBASIC7.43□□□□□ -1.22
LIG1P18858 RNA5SP308-201ENST00000362532 115 ntBASIC7.43□□□□□ -1.22
LIG1P18858 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC7.43□□□□□ -1.22
LIG1P18858 OR5H15-201ENST00000383696 930 ntBASIC7.43□□□□□ -1.22
LIG1P18858 Y_RNA.578-201ENST00000390903 88 ntBASIC7.43□□□□□ -1.22
LIG1P18858 OR2W4P-201ENST00000406496 926 ntBASIC7.43□□□□□ -1.22
LIG1P18858 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.43□□□□□ -1.22
LIG1P18858 AC116036.1-201ENST00000412199 367 ntBASIC7.43□□□□□ -1.22
LIG1P18858 GLUD1P9-201ENST00000420997 1173 ntBASIC7.43□□□□□ -1.22
LIG1P18858 TNPO1P1-201ENST00000423641 1138 ntBASIC7.43□□□□□ -1.22
LIG1P18858 AL589794.1-201ENST00000424971 390 ntBASIC7.43□□□□□ -1.22
LIG1P18858 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC7.43□□□□□ -1.22
LIG1P18858 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC7.43□□□□□ -1.22
LIG1P18858 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.43□□□□□ -1.22
LIG1P18858 MTATP6P13-201ENST00000438531 667 ntBASIC7.43□□□□□ -1.22
LIG1P18858 AC068135.1-201ENST00000446164 246 ntBASIC7.43□□□□□ -1.22
LIG1P18858 AL096803.2-201ENST00000450032 677 ntBASIC7.43□□□□□ -1.22
LIG1P18858 AL034369.1-201ENST00000453808 477 ntBASIC7.43□□□□□ -1.22
LIG1P18858 AC023245.1-201ENST00000468501 517 ntBASIC7.43□□□□□ -1.22
LIG1P18858 SYPL1P1-201ENST00000473622 768 ntBASIC7.43□□□□□ -1.22
LIG1P18858 RPS27AP16-201ENST00000492222 470 ntBASIC7.43□□□□□ -1.22
LIG1P18858 NAA50-206ENST00000493454 964 ntTSL 2 BASIC7.43□□□□□ -1.22
LIG1P18858 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC7.43□□□□□ -1.22
LIG1P18858 AC008837.1-201ENST00000511513 412 ntBASIC7.43□□□□□ -1.22
LIG1P18858 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC7.43□□□□□ -1.22
LIG1P18858 AC007068.2-201ENST00000543168 395 ntBASIC7.43□□□□□ -1.22
LIG1P18858 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.43□□□□□ -1.22
LIG1P18858 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LIG1P18858 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.43□□□□□ -1.22
LIG1P18858 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.43□□□□□ -1.22
LIG1P18858 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LIG1P18858 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC7.43□□□□□ -1.22
LIG1P18858 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC7.43□□□□□ -1.22
LIG1P18858 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.43□□□□□ -1.22
LIG1P18858 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC7.43□□□□□ -1.22
LIG1P18858 AP003392.5-201ENST00000607857 415 ntBASIC7.43□□□□□ -1.22
LIG1P18858 AL445423.1-201ENST00000609941 536 ntBASIC7.43□□□□□ -1.22
LIG1P18858 AC122133.1-201ENST00000613964 233 ntBASIC7.43□□□□□ -1.22
LIG1P18858 AC048341.3-201ENST00000619323 491 ntBASIC7.43□□□□□ -1.22
LIG1P18858 AC092656.1-203ENST00000624134 423 ntBASIC7.43□□□□□ -1.22
LIG1P18858 AC003992.1-201ENST00000635364 557 ntBASIC7.43□□□□□ -1.22
LIG1P18858 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC7.43□□□□□ -1.22
LIG1P18858 AC139713.2-210ENST00000641741 992 ntBASIC7.43□□□□□ -1.22
LIG1P18858 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LIG1P18858 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LIG1P18858 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
LIG1P18858 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LIG1P18858 AL929601.4-201ENST00000613011 1341 ntBASIC7.43□□□□□ -1.22
LIG1P18858 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.43□□□□□ -1.22
LIG1P18858 AL133268.1-201ENST00000405676 1401 ntBASIC7.43□□□□□ -1.22
LIG1P18858 RBPJP6-201ENST00000411556 1431 ntBASIC7.43□□□□□ -1.22
LIG1P18858 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.43□□□□□ -1.22
LIG1P18858 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.43□□□□□ -1.22
LIG1P18858 CUL4AP1-201ENST00000514750 1863 ntBASIC7.43□□□□□ -1.22
LIG1P18858 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC7.42□□□□□ -1.22
LIG1P18858 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
LIG1P18858 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms