Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.45□□□□□ -1.54
HMGA1P17096 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGA1P17096 AC090058.1-201ENST00000498788 435 ntBASIC5.45□□□□□ -1.54
HMGA1P17096 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.45□□□□□ -1.54
HMGA1P17096 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGA1P17096 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.45□□□□□ -1.54
HMGA1P17096 AP001922.4-201ENST00000526967 290 ntBASIC5.45□□□□□ -1.54
HMGA1P17096 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGA1P17096 AL627230.1-201ENST00000613077 211 ntBASIC5.45□□□□□ -1.54
HMGA1P17096 AL591926.8-201ENST00000616876 211 ntBASIC5.45□□□□□ -1.54
HMGA1P17096 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGA1P17096 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
HMGA1P17096 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGA1P17096 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGA1P17096 MSL3P1-202ENST00000440028 1468 ntBASIC5.45□□□□□ -1.54
HMGA1P17096 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGA1P17096 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.45□□□□□ -1.54
HMGA1P17096 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGA1P17096 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMGA1P17096 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.44□□□□□ -1.54
HMGA1P17096 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMGA1P17096 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGA1P17096 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGA1P17096 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGA1P17096 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HMGA1P17096 OR8V1P-201ENST00000395193 873 ntBASIC5.44□□□□□ -1.54
HMGA1P17096 GJA6P-201ENST00000415117 1042 ntBASIC5.44□□□□□ -1.54
HMGA1P17096 DDX39BP1-205ENST00000422507 192 ntBASIC5.44□□□□□ -1.54
HMGA1P17096 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.44□□□□□ -1.54
HMGA1P17096 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.44□□□□□ -1.54
HMGA1P17096 AL359265.1-201ENST00000440296 795 ntBASIC5.44□□□□□ -1.54
HMGA1P17096 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGA1P17096 AC093827.1-201ENST00000480094 861 ntBASIC5.44□□□□□ -1.54
HMGA1P17096 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.44□□□□□ -1.54
HMGA1P17096 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMGA1P17096 AC136777.2-201ENST00000522979 358 ntBASIC5.44□□□□□ -1.54
HMGA1P17096 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGA1P17096 DPPA3P2-201ENST00000553589 478 ntBASIC5.44□□□□□ -1.54
HMGA1P17096 MIR4691-201ENST00000583764 85 ntBASIC5.44□□□□□ -1.54
HMGA1P17096 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.44□□□□□ -1.54
HMGA1P17096 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.44□□□□□ -1.54
HMGA1P17096 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
HMGA1P17096 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGA1P17096 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HMGA1P17096 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HMGA1P17096 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGA1P17096 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HMGA1P17096 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGA1P17096 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGA1P17096 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGA1P17096 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGA1P17096 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGA1P17096 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGA1P17096 OFD1P17-201ENST00000437639 3018 ntBASIC5.43□□□□□ -1.54
HMGA1P17096 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HMGA1P17096 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
HMGA1P17096 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGA1P17096 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGA1P17096 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGA1P17096 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGA1P17096 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGA1P17096 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGA1P17096 RNA5SP514-201ENST00000363717 111 ntBASIC5.43□□□□□ -1.54
HMGA1P17096 SNORA51.8-201ENST00000384234 132 ntBASIC5.43□□□□□ -1.54
HMGA1P17096 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGA1P17096 NPM1P36-201ENST00000415681 835 ntBASIC5.43□□□□□ -1.54
HMGA1P17096 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGA1P17096 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGA1P17096 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGA1P17096 AC099670.2-201ENST00000435130 321 ntBASIC5.43□□□□□ -1.54
HMGA1P17096 RPL7P41-201ENST00000485823 957 ntBASIC5.43□□□□□ -1.54
HMGA1P17096 HMGN2P25-201ENST00000486956 268 ntBASIC5.43□□□□□ -1.54
HMGA1P17096 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.43□□□□□ -1.54
HMGA1P17096 AC111000.6-201ENST00000514471 709 ntBASIC5.43□□□□□ -1.54
HMGA1P17096 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGA1P17096 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.43□□□□□ -1.54
HMGA1P17096 AC022360.1-201ENST00000521058 340 ntBASIC5.43□□□□□ -1.54
HMGA1P17096 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGA1P17096 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.43□□□□□ -1.54
HMGA1P17096 AC005229.3-201ENST00000603438 323 ntBASIC5.43□□□□□ -1.54
HMGA1P17096 AC011626.1-201ENST00000604710 562 ntBASIC5.43□□□□□ -1.54
HMGA1P17096 MIR6133-201ENST00000617057 108 ntBASIC5.43□□□□□ -1.54
HMGA1P17096 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.43□□□□□ -1.54
HMGA1P17096 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGA1P17096 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGA1P17096 NXF4-202ENST00000416098 1465 ntBASIC5.43□□□□□ -1.54
HMGA1P17096 INTS6P1-201ENST00000504674 2530 ntBASIC5.43□□□□□ -1.54
HMGA1P17096 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGA1P17096 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGA1P17096 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGA1P17096 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGA1P17096 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGA1P17096 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGA1P17096 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMGA1P17096 AC016745.2-201ENST00000608834 3443 ntBASIC5.42□□□□□ -1.54
HMGA1P17096 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMGA1P17096 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HMGA1P17096 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMGA1P17096 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGA1P17096 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms