Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 ADAM24P-201ENST00000398655 2101 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 MUC2-202ENST00000613187 4845 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCL3L1P16619 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCL3L1P16619 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC4.33□□□□□ -1.72
CCL3L1P16619 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCL3L1P16619 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCL3L1P16619 RN7SKP153-201ENST00000365026 316 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 RNU1-43P-201ENST00000365052 165 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 OR1L6-202ENST00000373684 1044 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 MIR589-201ENST00000385238 99 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 MIR323B-201ENST00000385269 82 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCL3L1P16619 AP000534.2-201ENST00000412729 568 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCL3L1P16619 GTF3AP1-201ENST00000416942 1004 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 SLC35E1P1-201ENST00000419313 864 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCL3L1P16619 AL355433.1-201ENST00000422804 300 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.33□□□□□ -1.72
CCL3L1P16619 NANOGP4-201ENST00000427230 913 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 OR52B5P-201ENST00000435337 951 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.33□□□□□ -1.72
CCL3L1P16619 AC245047.2-201ENST00000441060 530 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 AC016772.1-201ENST00000444170 1261 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 AC009963.4-201ENST00000448535 339 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 AC090804.1-201ENST00000448870 490 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.33□□□□□ -1.72
CCL3L1P16619 RPL15P21-201ENST00000495592 567 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.33□□□□□ -1.72
CCL3L1P16619 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.33□□□□□ -1.72
CCL3L1P16619 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.33□□□□□ -1.72
CCL3L1P16619 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.33□□□□□ -1.72
CCL3L1P16619 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.33□□□□□ -1.72
CCL3L1P16619 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.33□□□□□ -1.72
CCL3L1P16619 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.33□□□□□ -1.72
CCL3L1P16619 MIR1269B-201ENST00000580405 75 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.33□□□□□ -1.72
CCL3L1P16619 AC009597.2-201ENST00000604659 592 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 AL162431.4-201ENST00000604674 411 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 AC011626.1-201ENST00000604710 562 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCL3L1P16619 OR52B5P-202ENST00000641118 1110 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
CCL3L1P16619 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CCL3L1P16619 AC008079.2-201ENST00000623543 20396 ntBASIC4.33□□□□□ -1.72
CCL3L1P16619 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCL3L1P16619 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCL3L1P16619 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCL3L1P16619 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCL3L1P16619 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCL3L1P16619 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCL3L1P16619 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCL3L1P16619 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCL3L1P16619 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CCL3L1P16619 AC027279.1-201ENST00000568885 4284 ntBASIC4.32□□□□□ -1.72
CCL3L1P16619 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCL3L1P16619 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.32□□□□□ -1.72
CCL3L1P16619 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.32□□□□□ -1.72
CCL3L1P16619 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.32□□□□□ -1.72
CCL3L1P16619 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCL3L1P16619 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCL3L1P16619 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCL3L1P16619 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCL3L1P16619 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CCL3L1P16619 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCL3L1P16619 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCL3L1P16619 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCL3L1P16619 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.32□□□□□ -1.72
CCL3L1P16619 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.32□□□□□ -1.72
CCL3L1P16619 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.32□□□□□ -1.72
CCL3L1P16619 AC093655.2-201ENST00000425735 631 ntBASIC4.32□□□□□ -1.72
CCL3L1P16619 RPL5P2-201ENST00000429598 854 ntBASIC4.32□□□□□ -1.72
CCL3L1P16619 FAR2P1-206ENST00000449736 709 ntBASIC4.32□□□□□ -1.72
CCL3L1P16619 AURKAPS1-201ENST00000451805 1212 ntBASIC4.32□□□□□ -1.72
CCL3L1P16619 Z92846.1-201ENST00000456203 268 ntBASIC4.32□□□□□ -1.72
CCL3L1P16619 RN7SL189P-201ENST00000468631 289 ntBASIC4.32□□□□□ -1.72
CCL3L1P16619 RPS21P4-201ENST00000487122 248 ntBASIC4.32□□□□□ -1.72
CCL3L1P16619 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.32□□□□□ -1.72
CCL3L1P16619 RPS24P16-201ENST00000497294 392 ntBASIC4.32□□□□□ -1.72
CCL3L1P16619 RPS4XP20-201ENST00000505751 772 ntBASIC4.32□□□□□ -1.72
CCL3L1P16619 HIGD1AP14-201ENST00000507617 282 ntBASIC4.32□□□□□ -1.72
CCL3L1P16619 SNORA81.2-201ENST00000516868 170 ntBASIC4.32□□□□□ -1.72
CCL3L1P16619 AC022360.1-201ENST00000521058 340 ntBASIC4.32□□□□□ -1.72
CCL3L1P16619 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.32□□□□□ -1.72
CCL3L1P16619 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.32□□□□□ -1.72
CCL3L1P16619 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCL3L1P16619 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.32□□□□□ -1.72
CCL3L1P16619 AC004825.1-201ENST00000555068 586 ntBASIC4.32□□□□□ -1.72
CCL3L1P16619 NPM1P5-201ENST00000557228 838 ntBASIC4.32□□□□□ -1.72
CCL3L1P16619 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.32□□□□□ -1.72
CCL3L1P16619 RN7SL708P-201ENST00000580952 299 ntBASIC4.32□□□□□ -1.72
CCL3L1P16619 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.32□□□□□ -1.72
CCL3L1P16619 AC008814.1-201ENST00000603797 406 ntBASIC4.32□□□□□ -1.72
CCL3L1P16619 RNA5SP439-201ENST00000617595 124 ntBASIC4.32□□□□□ -1.72
CCL3L1P16619 AC004808.2-201ENST00000627965 773 ntBASIC4.32□□□□□ -1.72
CCL3L1P16619 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCL3L1P16619 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CCL3L1P16619 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCL3L1P16619 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms