Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.6□□□□□ -1.51
PCNAP12004 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.6□□□□□ -1.51
PCNAP12004 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.6□□□□□ -1.51
PCNAP12004 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PCNAP12004 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.6□□□□□ -1.51
PCNAP12004 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.6□□□□□ -1.51
PCNAP12004 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCNAP12004 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PCNAP12004 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PCNAP12004 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
PCNAP12004 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCNAP12004 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.6□□□□□ -1.51
PCNAP12004 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCNAP12004 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCNAP12004 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCNAP12004 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCNAP12004 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCNAP12004 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCNAP12004 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCNAP12004 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCNAP12004 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCNAP12004 AC245100.2-201ENST00000454544 1679 ntBASIC5.59□□□□□ -1.51
PCNAP12004 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
PCNAP12004 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCNAP12004 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCNAP12004 SOCS5P3-201ENST00000425115 1576 ntBASIC5.59□□□□□ -1.51
PCNAP12004 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCNAP12004 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.59□□□□□ -1.51
PCNAP12004 IFIT1P1-201ENST00000400497 1449 ntBASIC5.59□□□□□ -1.51
PCNAP12004 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
PCNAP12004 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
PCNAP12004 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
PCNAP12004 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCNAP12004 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PCNAP12004 TMSB4XP2-201ENST00000335179 210 ntBASIC5.59□□□□□ -1.51
PCNAP12004 SNORD115-48-201ENST00000364764 76 ntBASIC5.59□□□□□ -1.51
PCNAP12004 RPL11P3-201ENST00000395256 523 ntBASIC5.59□□□□□ -1.51
PCNAP12004 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.59□□□□□ -1.51
PCNAP12004 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.59□□□□□ -1.51
PCNAP12004 AC110602.1-201ENST00000437414 318 ntBASIC5.59□□□□□ -1.51
PCNAP12004 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.59□□□□□ -1.51
PCNAP12004 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.59□□□□□ -1.51
PCNAP12004 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.59□□□□□ -1.51
PCNAP12004 AL122020.1-201ENST00000472287 459 ntBASIC5.59□□□□□ -1.51
PCNAP12004 STRADBP1-201ENST00000478954 1281 ntBASIC5.59□□□□□ -1.51
PCNAP12004 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCNAP12004 RN7SL649P-201ENST00000496974 275 ntBASIC5.59□□□□□ -1.51
PCNAP12004 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.59□□□□□ -1.51
PCNAP12004 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.59□□□□□ -1.51
PCNAP12004 OR5H7P-201ENST00000514084 930 ntBASIC5.59□□□□□ -1.51
PCNAP12004 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCNAP12004 AC138832.1-201ENST00000522871 556 ntBASIC5.59□□□□□ -1.51
PCNAP12004 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.59□□□□□ -1.51
PCNAP12004 AC027369.2-201ENST00000528030 440 ntBASIC5.59□□□□□ -1.51
PCNAP12004 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.59□□□□□ -1.51
PCNAP12004 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.59□□□□□ -1.51
PCNAP12004 PCNAP4-201ENST00000532690 730 ntBASIC5.59□□□□□ -1.51
PCNAP12004 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.59□□□□□ -1.51
PCNAP12004 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.59□□□□□ -1.51
PCNAP12004 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.59□□□□□ -1.51
PCNAP12004 AC006530.1-201ENST00000555980 571 ntBASIC5.59□□□□□ -1.51
PCNAP12004 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.59□□□□□ -1.51
PCNAP12004 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.59□□□□□ -1.51
PCNAP12004 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
PCNAP12004 AC006272.2-201ENST00000594725 163 ntBASIC5.59□□□□□ -1.51
PCNAP12004 QTRT1P1-201ENST00000604344 1078 ntBASIC5.59□□□□□ -1.51
PCNAP12004 MIR6793-201ENST00000612376 63 ntBASIC5.59□□□□□ -1.51
PCNAP12004 AC015722.2-201ENST00000622210 551 ntBASIC5.59□□□□□ -1.51
PCNAP12004 AC073593.1-201ENST00000624500 411 ntBASIC5.59□□□□□ -1.51
PCNAP12004 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.59□□□□□ -1.51
PCNAP12004 AL590396.2-201ENST00000636511 1041 ntBASIC5.59□□□□□ -1.51
PCNAP12004 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.59□□□□□ -1.51
PCNAP12004 AC079776.5-201ENST00000641920 211 ntBASIC5.59□□□□□ -1.51
PCNAP12004 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCNAP12004 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.59□□□□□ -1.51
PCNAP12004 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCNAP12004 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PCNAP12004 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
PCNAP12004 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
PCNAP12004 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PCNAP12004 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
PCNAP12004 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.59□□□□□ -1.52
PCNAP12004 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PCNAP12004 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PCNAP12004 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
PCNAP12004 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCNAP12004 MFSD8-239ENST00000641590 2479 ntBASIC5.58□□□□□ -1.52
PCNAP12004 AC093775.1-201ENST00000624154 1868 ntBASIC5.58□□□□□ -1.52
PCNAP12004 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PCNAP12004 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCNAP12004 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCNAP12004 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.58□□□□□ -1.52
PCNAP12004 RNA5SP187-201ENST00000384400 119 ntBASIC5.58□□□□□ -1.52
PCNAP12004 AC004386.1-201ENST00000393214 761 ntBASIC5.58□□□□□ -1.52
PCNAP12004 RN7SKP29-201ENST00000410957 272 ntBASIC5.58□□□□□ -1.52
PCNAP12004 BX284632.2-201ENST00000421091 399 ntBASIC5.58□□□□□ -1.52
PCNAP12004 HSFY7P-201ENST00000432672 318 ntBASIC5.58□□□□□ -1.52
PCNAP12004 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.58□□□□□ -1.52
PCNAP12004 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCNAP12004 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms