Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DPB1P04440 AL731532.2-201ENST00000623542 1953 ntBASIC4.82□□□□□ -1.64
HLA-DPB1P04440 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 CASC19-248ENST00000641674 1356 ntBASIC4.81□□□□□ -1.64
HLA-DPB1P04440 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 RNA5SP284-201ENST00000384547 118 ntBASIC4.81□□□□□ -1.64
HLA-DPB1P04440 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 RPS29P14-201ENST00000431518 171 ntBASIC4.81□□□□□ -1.64
HLA-DPB1P04440 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 SUMO2P3-201ENST00000438311 288 ntBASIC4.81□□□□□ -1.64
HLA-DPB1P04440 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 EEF1B2P6-201ENST00000445713 673 ntBASIC4.81□□□□□ -1.64
HLA-DPB1P04440 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 RN7SL583P-201ENST00000475692 287 ntBASIC4.81□□□□□ -1.64
HLA-DPB1P04440 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 AC127381.1-201ENST00000555979 939 ntBASIC4.81□□□□□ -1.64
HLA-DPB1P04440 AC093524.1-201ENST00000564266 1094 ntBASIC4.81□□□□□ -1.64
HLA-DPB1P04440 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 AC016252.1-201ENST00000609721 474 ntBASIC4.81□□□□□ -1.64
HLA-DPB1P04440 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 AC244107.2-201ENST00000611773 76 ntBASIC4.81□□□□□ -1.64
HLA-DPB1P04440 AC109583.2-201ENST00000617367 129 ntBASIC4.81□□□□□ -1.64
HLA-DPB1P04440 MIR6839-201ENST00000620425 113 ntBASIC4.81□□□□□ -1.64
HLA-DPB1P04440 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 RNF19BPY-201ENST00000458209 1550 ntBASIC4.81□□□□□ -1.64
HLA-DPB1P04440 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DPB1P04440 AC100778.3-201ENST00000580060 1750 ntBASIC4.81□□□□□ -1.64
HLA-DPB1P04440 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AC114786.1-201ENST00000512892 1415 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AL731566.1-201ENST00000620490 1937 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 BX284613.1-201ENST00000452221 1641 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 OR9G4-201ENST00000302957 984 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 RN7SKP153-201ENST00000365026 316 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 RN7SKP292-201ENST00000365522 317 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 OR2AT2P-201ENST00000413438 905 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 SMC4P1-201ENST00000414479 527 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 MTND6P12-201ENST00000428247 522 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AC124944.2-201ENST00000429866 1242 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AC079807.1-201ENST00000429993 481 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 KATNBL1P2-201ENST00000433311 835 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 RPL23AP19-201ENST00000436229 369 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AC006335.2-201ENST00000437993 330 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AC005297.1-201ENST00000444765 862 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AL157385.1-201ENST00000446973 268 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 LRRC37A14P-201ENST00000452297 462 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AC144530.1-201ENST00000452862 555 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AP000547.1-201ENST00000454360 617 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AC090568.1-201ENST00000509499 856 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 OR11H3P-201ENST00000554547 982 ntBASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DPB1P04440 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms