Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
MT-ND1P03886 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
MT-ND1P03886 SUGT1P2-201ENST00000379452 992 ntBASIC5.11□□□□□ -1.59
MT-ND1P03886 RNU6-1320P-201ENST00000390838 107 ntBASIC5.11□□□□□ -1.59
MT-ND1P03886 RNU6-1269P-201ENST00000391139 107 ntBASIC5.11□□□□□ -1.59
MT-ND1P03886 AC211486.3-201ENST00000412694 621 ntBASIC5.11□□□□□ -1.59
MT-ND1P03886 AL121878.1-201ENST00000418638 859 ntBASIC5.11□□□□□ -1.59
MT-ND1P03886 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.11□□□□□ -1.59
MT-ND1P03886 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.11□□□□□ -1.59
MT-ND1P03886 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.11□□□□□ -1.59
MT-ND1P03886 AL035660.1-201ENST00000422041 222 ntBASIC5.11□□□□□ -1.59
MT-ND1P03886 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
MT-ND1P03886 AL022331.1-201ENST00000429025 477 ntBASIC5.11□□□□□ -1.59
MT-ND1P03886 AC069154.1-201ENST00000432914 542 ntBASIC5.11□□□□□ -1.59
MT-ND1P03886 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.11□□□□□ -1.59
MT-ND1P03886 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.11□□□□□ -1.59
MT-ND1P03886 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.11□□□□□ -1.59
MT-ND1P03886 RNU6-599P-201ENST00000459383 107 ntBASIC5.11□□□□□ -1.59
MT-ND1P03886 RNU6-1193P-201ENST00000459461 107 ntBASIC5.11□□□□□ -1.59
MT-ND1P03886 CCNHP1-201ENST00000513311 678 ntBASIC5.11□□□□□ -1.59
MT-ND1P03886 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.11□□□□□ -1.59
MT-ND1P03886 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.11□□□□□ -1.59
MT-ND1P03886 AP000859.1-201ENST00000525536 307 ntBASIC5.11□□□□□ -1.59
MT-ND1P03886 AC027369.5-201ENST00000533838 755 ntBASIC5.11□□□□□ -1.59
MT-ND1P03886 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.11□□□□□ -1.59
MT-ND1P03886 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.11□□□□□ -1.59
MT-ND1P03886 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.11□□□□□ -1.59
MT-ND1P03886 AP005403.1-201ENST00000579720 229 ntBASIC5.11□□□□□ -1.59
MT-ND1P03886 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.11□□□□□ -1.59
MT-ND1P03886 AC063977.5-201ENST00000601044 974 ntBASIC5.11□□□□□ -1.59
MT-ND1P03886 MIR6889-201ENST00000613185 59 ntBASIC5.11□□□□□ -1.59
MT-ND1P03886 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
MT-ND1P03886 RNU6-368P-201ENST00000620928 107 ntBASIC5.11□□□□□ -1.59
MT-ND1P03886 RNU6-538P-201ENST00000622329 107 ntBASIC5.11□□□□□ -1.59
MT-ND1P03886 MTCO1P1-201ENST00000624263 1081 ntBASIC5.11□□□□□ -1.59
MT-ND1P03886 AC073869.8-201ENST00000641806 335 ntBASIC5.11□□□□□ -1.59
MT-ND1P03886 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
MT-ND1P03886 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
MT-ND1P03886 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
MT-ND1P03886 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
MT-ND1P03886 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
MT-ND1P03886 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.11□□□□□ -1.59
MT-ND1P03886 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
MT-ND1P03886 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.11□□□□□ -1.59
MT-ND1P03886 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
MT-ND1P03886 AC114947.2-201ENST00000565748 2125 ntBASIC5.11□□□□□ -1.59
MT-ND1P03886 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
MT-ND1P03886 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
MT-ND1P03886 Z95331.1-201ENST00000623075 23112 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.1□□□□□ -1.59
MT-ND1P03886 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
MT-ND1P03886 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.1□□□□□ -1.59
MT-ND1P03886 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
MT-ND1P03886 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
MT-ND1P03886 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
MT-ND1P03886 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.1□□□□□ -1.59
MT-ND1P03886 RNU6-1263P-201ENST00000384601 106 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 AC004386.1-201ENST00000393214 761 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
MT-ND1P03886 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.1□□□□□ -1.59
MT-ND1P03886 RPL21P67-201ENST00000402896 478 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.1□□□□□ -1.59
MT-ND1P03886 AC007161.1-204ENST00000423039 460 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.1□□□□□ -1.59
MT-ND1P03886 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.1□□□□□ -1.59
MT-ND1P03886 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
MT-ND1P03886 AC006335.2-201ENST00000437993 330 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 CYCSP51-201ENST00000443545 318 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.1□□□□□ -1.59
MT-ND1P03886 MRE11P1-201ENST00000464884 2127 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 AC093827.1-201ENST00000480094 861 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 AC022215.1-201ENST00000481770 362 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.1□□□□□ -1.59
MT-ND1P03886 COX6B1P2-201ENST00000489624 230 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 NIFKP7-201ENST00000503365 834 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 NENFP3-201ENST00000503735 313 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.1□□□□□ -1.59
MT-ND1P03886 AC016559.2-201ENST00000510759 359 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.1□□□□□ -1.59
MT-ND1P03886 AC011853.1-201ENST00000518911 454 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.1□□□□□ -1.59
MT-ND1P03886 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.1□□□□□ -1.59
MT-ND1P03886 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.1□□□□□ -1.59
MT-ND1P03886 AC015689.2-201ENST00000528172 1738 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
MT-ND1P03886 TRIM51GP-201ENST00000534741 1350 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
MT-ND1P03886 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
MT-ND1P03886 LSM3P2-201ENST00000551246 273 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.1□□□□□ -1.59
MT-ND1P03886 SMG1P7-201ENST00000565246 2704 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.1□□□□□ -1.59
MT-ND1P03886 SNORD39.2-201ENST00000579995 76 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 AC127024.5-201ENST00000580085 462 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.1□□□□□ -1.59
MT-ND1P03886 H3F3BP2-201ENST00000583907 357 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 LINC02019-201ENST00000608605 2060 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 AC073575.2-201ENST00000614212 627 ntBASIC5.1□□□□□ -1.59
MT-ND1P03886 AC048341.3-201ENST00000619323 491 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms