Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS4BO75351 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS4BO75351 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS4BO75351 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.97□□□□□ -1.45
VPS4BO75351 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS4BO75351 CHEK2P5-201ENST00000423877 246 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS4BO75351 OSTCP4-201ENST00000424397 449 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS4BO75351 AC092651.1-201ENST00000426110 312 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 DSTNP5-201ENST00000427921 523 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 RPSAP65-201ENST00000429660 595 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 SETP8-201ENST00000435341 628 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 EMC3-AS1-205ENST00000438698 534 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 SOCS5P1-201ENST00000440415 949 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 AL645936.1-201ENST00000441979 518 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 RPL31P15-201ENST00000449770 338 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS4BO75351 AC093166.2-201ENST00000455969 1017 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS4BO75351 PPIAP19-201ENST00000486414 492 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 GM2AP2-201ENST00000491764 562 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 RPS26P24-201ENST00000497656 331 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 LSM3P4-201ENST00000502948 309 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS4BO75351 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS4BO75351 KHDC1P1-201ENST00000511053 508 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 AC112673.1-201ENST00000513168 575 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 TPM3P3-201ENST00000521343 354 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 TRIM77BP-201ENST00000524985 1119 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS4BO75351 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS4BO75351 NANOGNBP2-201ENST00000544753 553 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS4BO75351 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS4BO75351 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VPS4BO75351 MTND3P12-201ENST00000559068 328 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS4BO75351 AC021483.2-201ENST00000567415 758 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS4BO75351 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS4BO75351 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
VPS4BO75351 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS4BO75351 AC022022.2-201ENST00000602989 360 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 AC009237.12-201ENST00000604755 742 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 AL450336.1-201ENST00000605180 586 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 AC093673.2-201ENST00000609674 331 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS4BO75351 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS4BO75351 AC120349.3-201ENST00000624377 529 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 AC073488.6-201ENST00000632293 754 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 AP000550.3-201ENST00000637734 379 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS4BO75351 AP001153.1-201ENST00000641024 338 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
VPS4BO75351 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS4BO75351 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS4BO75351 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS4BO75351 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.97□□□□□ -1.45
VPS4BO75351 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
VPS4BO75351 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS4BO75351 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS4BO75351 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
VPS4BO75351 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
VPS4BO75351 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
VPS4BO75351 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
VPS4BO75351 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.96□□□□□ -1.45
VPS4BO75351 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
VPS4BO75351 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.96□□□□□ -1.45
VPS4BO75351 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS4BO75351 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
VPS4BO75351 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
VPS4BO75351 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS4BO75351 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS4BO75351 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS4BO75351 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS4BO75351 AC112255.1-201ENST00000624070 2493 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS4BO75351 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS4BO75351 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
VPS4BO75351 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 NPM1P37-201ENST00000403105 874 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 RNA5SP178-201ENST00000410380 128 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 SNORA79B-201ENST00000410557 148 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 RN7SKP144-201ENST00000411108 279 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 RN7SKP17-201ENST00000411242 351 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 SLC20A1P1-201ENST00000413906 956 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.96□□□□□ -1.46
VPS4BO75351 AL590399.2-201ENST00000427536 309 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS4BO75351 CLUHP1-201ENST00000435012 1190 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.96□□□□□ -1.46
VPS4BO75351 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS4BO75351 AL138787.1-202ENST00000437804 898 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 MTCO1P53-201ENST00000441633 699 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 GAPDHP23-201ENST00000444823 993 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 RPL6P5-201ENST00000445678 828 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 AL358794.1-201ENST00000445689 381 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 AL162739.1-201ENST00000450606 307 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms