Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC021146.10-201ENST00000515628 706 ntBASIC5.7□□□□□ -1.5
SMAD6O43541 NRBF2P4-201ENST00000520874 850 ntBASIC5.7□□□□□ -1.5
SMAD6O43541 OR8X1P-201ENST00000534542 869 ntBASIC5.7□□□□□ -1.5
SMAD6O43541 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.7□□□□□ -1.5
SMAD6O43541 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.7□□□□□ -1.5
SMAD6O43541 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.7□□□□□ -1.5
SMAD6O43541 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.7□□□□□ -1.5
SMAD6O43541 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.7□□□□□ -1.5
SMAD6O43541 MIR4311-201ENST00000580794 100 ntBASIC5.7□□□□□ -1.5
SMAD6O43541 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.7□□□□□ -1.5
SMAD6O43541 AL050303.3-201ENST00000613704 284 ntBASIC5.7□□□□□ -1.5
SMAD6O43541 AC016957.2-201ENST00000616998 848 ntBASIC5.7□□□□□ -1.5
SMAD6O43541 AP000484.1-201ENST00000620067 1252 ntBASIC5.7□□□□□ -1.5
SMAD6O43541 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SMAD6O43541 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SMAD6O43541 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SMAD6O43541 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SMAD6O43541 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SMAD6O43541 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SMAD6O43541 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SMAD6O43541 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.7□□□□□ -1.5
SMAD6O43541 AC018809.2-201ENST00000602436 3823 ntBASIC5.7□□□□□ -1.5
SMAD6O43541 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SMAD6O43541 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SMAD6O43541 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.7□□□□□ -1.5
SMAD6O43541 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SMAD6O43541 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SMAD6O43541 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SMAD6O43541 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
SMAD6O43541 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SMAD6O43541 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SMAD6O43541 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SMAD6O43541 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.69□□□□□ -1.5
SMAD6O43541 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.69□□□□□ -1.5
SMAD6O43541 RN7SKP279-201ENST00000411383 298 ntBASIC5.69□□□□□ -1.5
SMAD6O43541 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SMAD6O43541 AL034379.1-201ENST00000423216 253 ntBASIC5.69□□□□□ -1.5
SMAD6O43541 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.69□□□□□ -1.5
SMAD6O43541 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SMAD6O43541 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.69□□□□□ -1.5
SMAD6O43541 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.69□□□□□ -1.5
SMAD6O43541 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.69□□□□□ -1.5
SMAD6O43541 MTCYBP11-201ENST00000447254 1109 ntBASIC5.69□□□□□ -1.5
SMAD6O43541 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.69□□□□□ -1.5
SMAD6O43541 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.69□□□□□ -1.5
SMAD6O43541 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.69□□□□□ -1.5
SMAD6O43541 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SMAD6O43541 EIF3LP3-201ENST00000495197 822 ntBASIC5.69□□□□□ -1.5
SMAD6O43541 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.69□□□□□ -1.5
SMAD6O43541 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.69□□□□□ -1.5
SMAD6O43541 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.69□□□□□ -1.5
SMAD6O43541 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SMAD6O43541 AP003102.1-201ENST00000525638 661 ntBASIC5.69□□□□□ -1.5
SMAD6O43541 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.69□□□□□ -1.5
SMAD6O43541 AC137627.1-201ENST00000545761 289 ntBASIC5.69□□□□□ -1.5
SMAD6O43541 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.69□□□□□ -1.5
SMAD6O43541 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.69□□□□□ -1.5
SMAD6O43541 OR1AB1P-201ENST00000585564 761 ntBASIC5.69□□□□□ -1.5
SMAD6O43541 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.69□□□□□ -1.5
SMAD6O43541 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.69□□□□□ -1.5
SMAD6O43541 PPATP2-201ENST00000605635 508 ntBASIC5.69□□□□□ -1.5
SMAD6O43541 NANOGP3-201ENST00000605855 286 ntBASIC5.69□□□□□ -1.5
SMAD6O43541 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SMAD6O43541 AP000894.4-201ENST00000610185 483 ntBASIC5.69□□□□□ -1.5
SMAD6O43541 AL512624.1-201ENST00000613638 469 ntBASIC5.69□□□□□ -1.5
SMAD6O43541 AL359513.1-201ENST00000614364 557 ntBASIC5.69□□□□□ -1.5
SMAD6O43541 AC025574.2-201ENST00000615621 514 ntBASIC5.69□□□□□ -1.5
SMAD6O43541 AC132068.1-201ENST00000623805 459 ntBASIC5.69□□□□□ -1.5
SMAD6O43541 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.69□□□□□ -1.5
SMAD6O43541 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.69□□□□□ -1.5
SMAD6O43541 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SMAD6O43541 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
SMAD6O43541 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SMAD6O43541 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.69□□□□□ -1.5
SMAD6O43541 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SMAD6O43541 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SMAD6O43541 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.68□□□□□ -1.5
SMAD6O43541 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SMAD6O43541 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SMAD6O43541 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SMAD6O43541 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SMAD6O43541 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.68□□□□□ -1.5
SMAD6O43541 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SMAD6O43541 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.68□□□□□ -1.5
SMAD6O43541 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SMAD6O43541 AC104964.3-201ENST00000606115 2860 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.68□□□□□ -1.5
SMAD6O43541 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SMAD6O43541 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.68□□□□□ -1.5
SMAD6O43541 RNU4-23P-201ENST00000362839 140 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 RN7SKP160-201ENST00000363804 340 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 RNA5SP234-201ENST00000363916 119 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 RN7SKP28-201ENST00000364770 305 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 RNU1-136P-201ENST00000384181 164 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 MIR143-201ENST00000385300 106 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 RNU11-201ENST00000387069 134 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 AC005042.1-201ENST00000393397 800 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 AL391361.1-201ENST00000405580 489 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 DHFRP5-201ENST00000406944 564 ntBASIC5.68□□□□□ -1.5
SMAD6O43541 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms