Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SCARNA18.1-201ENST00000516330 83 ntBASIC6□□□□□ -1.45
TRIM38O00635 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6□□□□□ -1.45
TRIM38O00635 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6□□□□□ -1.45
TRIM38O00635 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6□□□□□ -1.45
TRIM38O00635 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6□□□□□ -1.45
TRIM38O00635 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6□□□□□ -1.45
TRIM38O00635 AC068339.2-201ENST00000534395 618 ntBASIC6□□□□□ -1.45
TRIM38O00635 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC6□□□□□ -1.45
TRIM38O00635 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6□□□□□ -1.45
TRIM38O00635 AP001357.1-201ENST00000586304 1053 ntBASIC6□□□□□ -1.45
TRIM38O00635 AL583832.1-201ENST00000603227 784 ntBASIC6□□□□□ -1.45
TRIM38O00635 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6□□□□□ -1.45
TRIM38O00635 AC006924.1-201ENST00000610750 559 ntBASIC6□□□□□ -1.45
TRIM38O00635 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM38O00635 AC004241.3-201ENST00000611728 517 ntBASIC6□□□□□ -1.45
TRIM38O00635 AC018926.1-201ENST00000616335 435 ntBASIC6□□□□□ -1.45
TRIM38O00635 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6□□□□□ -1.45
TRIM38O00635 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM38O00635 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM38O00635 AC087516.1-201ENST00000561236 2428 ntBASIC6□□□□□ -1.45
TRIM38O00635 MT-RNR2-201ENST00000387347 1559 ntBASIC6□□□□□ -1.45
TRIM38O00635 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM38O00635 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM38O00635 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM38O00635 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
TRIM38O00635 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM38O00635 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM38O00635 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6□□□□□ -1.45
TRIM38O00635 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM38O00635 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM38O00635 AC004656.1-201ENST00000568479 4951 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 AC015689.2-201ENST00000528172 1738 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 AP001541.1-201ENST00000623322 1904 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 AC140134.1-201ENST00000511830 3544 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM38O00635 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM38O00635 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM38O00635 AL121950.1-201ENST00000624993 2077 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM38O00635 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM38O00635 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM38O00635 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
TRIM38O00635 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM38O00635 SNORA72.3-201ENST00000365074 132 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 MIR137-201ENST00000385223 102 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM38O00635 RNU2-22P-201ENST00000411266 212 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.99□□□□□ -1.45
TRIM38O00635 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM38O00635 OR2X1P-201ENST00000421144 687 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 AL035660.1-201ENST00000422041 222 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 AL160175.1-201ENST00000428124 247 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 BX119904.1-201ENST00000432026 348 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 MTCYBP12-201ENST00000440559 1134 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM38O00635 GAPDHP23-201ENST00000444823 993 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM38O00635 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM38O00635 RBMY2TP-201ENST00000451162 947 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 RN7SL177P-201ENST00000476596 299 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 AC079080.1-201ENST00000479841 822 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM38O00635 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM38O00635 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM38O00635 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
TRIM38O00635 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM38O00635 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM38O00635 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.99□□□□□ -1.45
TRIM38O00635 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.99□□□□□ -1.45
TRIM38O00635 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM38O00635 AC025918.2-201ENST00000558683 763 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM38O00635 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.99□□□□□ -1.45
TRIM38O00635 AC005244.1-201ENST00000582566 339 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 FAM72A-208ENST00000607379 1139 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 MIR8084-201ENST00000614105 89 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 AC016957.2-201ENST00000616998 848 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM38O00635 AL591135.1-201ENST00000401578 5914 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM38O00635 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM38O00635 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
TRIM38O00635 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM38O00635 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.99□□□□□ -1.45
TRIM38O00635 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM38O00635 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM38O00635 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM38O00635 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM38O00635 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
TRIM38O00635 CIR1P2-201ENST00000514821 1342 ntBASIC5.99□□□□□ -1.45
TRIM38O00635 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.98□□□□□ -1.45
TRIM38O00635 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
TRIM38O00635 AL359955.1-201ENST00000455242 3275 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM38O00635 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
TRIM38O00635 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM38O00635 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.98□□□□□ -1.45
TRIM38O00635 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM38O00635 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM38O00635 RNU1-150P-201ENST00000362491 162 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms