Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
O00370 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
O00370 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.84□□□□□ -1.47
O00370 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
O00370 CDC27P2-201ENST00000425026 1922 ntBASIC5.84□□□□□ -1.47
O00370 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
O00370 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.84□□□□□ -1.47
O00370 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
O00370 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
O00370 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
O00370 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
O00370 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.84□□□□□ -1.47
O00370 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
O00370 RNA5SP234-201ENST00000363916 119 ntBASIC5.84□□□□□ -1.47
O00370 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
O00370 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.84□□□□□ -1.47
O00370 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
O00370 NDUFB4P8-201ENST00000435351 367 ntBASIC5.84□□□□□ -1.47
O00370 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.84□□□□□ -1.47
O00370 AC012075.1-201ENST00000436549 580 ntBASIC5.84□□□□□ -1.47
O00370 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.84□□□□□ -1.47
O00370 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.84□□□□□ -1.47
O00370 CYCSP51-201ENST00000443545 318 ntBASIC5.84□□□□□ -1.47
O00370 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.84□□□□□ -1.47
O00370 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.84□□□□□ -1.47
O00370 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.84□□□□□ -1.47
O00370 RANP1-206ENST00000455094 651 ntBASIC5.84□□□□□ -1.47
O00370 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.84□□□□□ -1.47
O00370 RN7SL188P-201ENST00000469842 285 ntBASIC5.84□□□□□ -1.47
O00370 AC104109.1-201ENST00000498563 436 ntBASIC5.84□□□□□ -1.47
O00370 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.84□□□□□ -1.47
O00370 IGLVIV-64-201ENST00000518581 301 ntBASIC5.84□□□□□ -1.47
O00370 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.84□□□□□ -1.47
O00370 OR4A17P-201ENST00000526032 904 ntBASIC5.84□□□□□ -1.47
O00370 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.84□□□□□ -1.47
O00370 AC015720.2-201ENST00000567709 334 ntBASIC5.84□□□□□ -1.47
O00370 MTATP6P25-201ENST00000574491 261 ntBASIC5.84□□□□□ -1.47
O00370 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
O00370 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.84□□□□□ -1.47
O00370 QTRT1P1-201ENST00000604344 1078 ntBASIC5.84□□□□□ -1.47
O00370 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
O00370 FAM72A-208ENST00000607379 1139 ntBASIC5.84□□□□□ -1.47
O00370 OR51C1P-201ENST00000608504 942 ntBASIC5.84□□□□□ -1.47
O00370 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
O00370 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
O00370 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
O00370 AC003985.2-201ENST00000562268 1669 ntBASIC5.84□□□□□ -1.47
O00370 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
O00370 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.48
O00370 Z83820.1-201ENST00000456978 1499 ntBASIC5.83□□□□□ -1.48
O00370 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
O00370 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.83□□□□□ -1.48
O00370 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
O00370 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
O00370 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
O00370 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.83□□□□□ -1.48
O00370 AC233968.1-201ENST00000611212 1300 ntBASIC5.83□□□□□ -1.48
O00370 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
O00370 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
O00370 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
O00370 RN7SKP124-201ENST00000364730 341 ntBASIC5.83□□□□□ -1.48
O00370 AL512422.1-201ENST00000407033 553 ntBASIC5.83□□□□□ -1.48
O00370 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.83□□□□□ -1.48
O00370 MTND4LP21-201ENST00000415303 295 ntBASIC5.83□□□□□ -1.48
O00370 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.83□□□□□ -1.48
O00370 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.83□□□□□ -1.48
O00370 AL391987.1-201ENST00000441025 200 ntBASIC5.83□□□□□ -1.48
O00370 RPSAP39-201ENST00000467439 883 ntBASIC5.83□□□□□ -1.48
O00370 AL133372.1-201ENST00000493565 745 ntBASIC5.83□□□□□ -1.48
O00370 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.83□□□□□ -1.48
O00370 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.83□□□□□ -1.48
O00370 RNU6-751P-201ENST00000516382 101 ntBASIC5.83□□□□□ -1.48
O00370 SEPT10P1-201ENST00000517342 1162 ntBASIC5.83□□□□□ -1.48
O00370 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.83□□□□□ -1.48
O00370 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.83□□□□□ -1.48
O00370 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
O00370 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.83□□□□□ -1.48
O00370 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.83□□□□□ -1.48
O00370 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
O00370 AC004477.3-201ENST00000614061 590 ntBASIC5.83□□□□□ -1.48
O00370 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.83□□□□□ -1.48
O00370 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.83□□□□□ -1.48
O00370 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
O00370 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
O00370 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
O00370 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
O00370 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.83□□□□□ -1.48
O00370 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
O00370 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
O00370 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.83□□□□□ -1.48
O00370 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
O00370 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
O00370 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
O00370 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.83□□□□□ -1.48
O00370 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.82□□□□□ -1.48
O00370 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.82□□□□□ -1.48
O00370 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.82□□□□□ -1.48
O00370 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
O00370 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
O00370 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms