Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.1□□□□□ -1.43
DDX39AO00148 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
DDX39AO00148 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
DDX39AO00148 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
DDX39AO00148 THAP12P8-201ENST00000447914 2115 ntBASIC6.1□□□□□ -1.43
DDX39AO00148 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
DDX39AO00148 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
DDX39AO00148 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
DDX39AO00148 AL590763.1-201ENST00000398297 1545 ntBASIC6.09□□□□□ -1.43
DDX39AO00148 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
DDX39AO00148 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
DDX39AO00148 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.09□□□□□ -1.43
DDX39AO00148 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
DDX39AO00148 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
DDX39AO00148 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.09□□□□□ -1.43
DDX39AO00148 AP002512.4-202ENST00000641599 4530 ntBASIC6.09□□□□□ -1.43
DDX39AO00148 AC109780.1-201ENST00000451768 1344 ntBASIC6.09□□□□□ -1.43
DDX39AO00148 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
DDX39AO00148 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
DDX39AO00148 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
DDX39AO00148 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
DDX39AO00148 U3.28-201ENST00000391249 210 ntBASIC6.09□□□□□ -1.43
DDX39AO00148 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.09□□□□□ -1.43
DDX39AO00148 VN1R31P-201ENST00000417498 730 ntBASIC6.09□□□□□ -1.43
DDX39AO00148 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.09□□□□□ -1.43
DDX39AO00148 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.09□□□□□ -1.43
DDX39AO00148 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.09□□□□□ -1.43
DDX39AO00148 AL163193.1-201ENST00000444895 788 ntBASIC6.09□□□□□ -1.43
DDX39AO00148 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.09□□□□□ -1.43
DDX39AO00148 FAR2P1-206ENST00000449736 709 ntBASIC6.09□□□□□ -1.43
DDX39AO00148 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.09□□□□□ -1.43
DDX39AO00148 RN7SL172P-201ENST00000460535 303 ntBASIC6.09□□□□□ -1.43
DDX39AO00148 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.09□□□□□ -1.43
DDX39AO00148 AC092754.1-201ENST00000472975 479 ntBASIC6.09□□□□□ -1.43
DDX39AO00148 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.09□□□□□ -1.43
DDX39AO00148 AC072052.1-201ENST00000496556 306 ntBASIC6.09□□□□□ -1.43
DDX39AO00148 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.09□□□□□ -1.43
DDX39AO00148 HMGB1P44-201ENST00000508597 572 ntBASIC6.09□□□□□ -1.43
DDX39AO00148 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.09□□□□□ -1.43
DDX39AO00148 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.09□□□□□ -1.43
DDX39AO00148 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.09□□□□□ -1.43
DDX39AO00148 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.09□□□□□ -1.43
DDX39AO00148 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.09□□□□□ -1.43
DDX39AO00148 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.09□□□□□ -1.43
DDX39AO00148 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
DDX39AO00148 OR11J2P-201ENST00000555298 907 ntBASIC6.09□□□□□ -1.43
DDX39AO00148 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.09□□□□□ -1.43
DDX39AO00148 AC018558.5-201ENST00000565840 952 ntBASIC6.09□□□□□ -1.43
DDX39AO00148 AC073869.8-201ENST00000641806 335 ntBASIC6.09□□□□□ -1.43
DDX39AO00148 AC245100.2-201ENST00000454544 1679 ntBASIC6.09□□□□□ -1.43
DDX39AO00148 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.09□□□□□ -1.43
DDX39AO00148 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
DDX39AO00148 AC011493.1-201ENST00000596753 1632 ntBASIC6.09□□□□□ -1.43
DDX39AO00148 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
DDX39AO00148 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
DDX39AO00148 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
DDX39AO00148 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
DDX39AO00148 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.09□□□□□ -1.44
DDX39AO00148 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.08□□□□□ -1.44
DDX39AO00148 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.08□□□□□ -1.44
DDX39AO00148 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
DDX39AO00148 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DDX39AO00148 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
DDX39AO00148 GVINP1-202ENST00000531871 7271 ntBASIC6.08□□□□□ -1.44
DDX39AO00148 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
DDX39AO00148 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
DDX39AO00148 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
DDX39AO00148 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.08□□□□□ -1.44
DDX39AO00148 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.08□□□□□ -1.44
DDX39AO00148 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
DDX39AO00148 RNA5SP183-201ENST00000362452 119 ntBASIC6.08□□□□□ -1.44
DDX39AO00148 U3.2-201ENST00000362981 210 ntBASIC6.08□□□□□ -1.44
DDX39AO00148 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.08□□□□□ -1.44
DDX39AO00148 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.08□□□□□ -1.44
DDX39AO00148 SLC35E1P1-201ENST00000419313 864 ntBASIC6.08□□□□□ -1.44
DDX39AO00148 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.08□□□□□ -1.44
DDX39AO00148 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.08□□□□□ -1.44
DDX39AO00148 LINC02210-201ENST00000444561 288 ntBASIC6.08□□□□□ -1.44
DDX39AO00148 AL672138.1-201ENST00000450604 1015 ntBASIC6.08□□□□□ -1.44
DDX39AO00148 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.08□□□□□ -1.44
DDX39AO00148 AL133372.1-201ENST00000493565 745 ntBASIC6.08□□□□□ -1.44
DDX39AO00148 AC008638.1-201ENST00000506035 866 ntBASIC6.08□□□□□ -1.44
DDX39AO00148 AC113398.2-201ENST00000507630 558 ntBASIC6.08□□□□□ -1.44
DDX39AO00148 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.08□□□□□ -1.44
DDX39AO00148 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.08□□□□□ -1.44
DDX39AO00148 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
DDX39AO00148 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
DDX39AO00148 AP005212.4-201ENST00000614206 710 ntBASIC6.08□□□□□ -1.44
DDX39AO00148 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.08□□□□□ -1.44
DDX39AO00148 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.08□□□□□ -1.44
DDX39AO00148 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DDX39AO00148 AC015799.1-201ENST00000622996 3122 ntBASIC6.08□□□□□ -1.44
DDX39AO00148 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
DDX39AO00148 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
DDX39AO00148 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DDX39AO00148 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.08□□□□□ -1.44
DDX39AO00148 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DDX39AO00148 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.08□□□□□ -1.44
DDX39AO00148 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
DDX39AO00148 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms