Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL132656.3-201ENST00000606384 1595 ntBASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC023632.6-201ENST00000624338 2177 ntBASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 THAP12P5-201ENST00000405864 2275 ntBASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 NPM1P22-201ENST00000427761 952 ntBASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 CYCSP6-201ENST00000434498 302 ntBASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 VDAC2P4-201ENST00000452925 711 ntBASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC005532.2-201ENST00000467154 373 ntBASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 RNA5SP230-201ENST00000517039 122 ntBASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC090424.1-201ENST00000535243 736 ntBASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC068870.2-201ENST00000620635 389 ntBASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC138965.3-201ENST00000623875 498 ntBASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC136428.4-201ENST00000634254 1155 ntBASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC063923.1-201ENST00000478982 1619 ntBASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 HSPA8P14-201ENST00000552265 1805 ntBASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 RPL11P3-201ENST00000395256 523 ntBASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 GPS2P1-201ENST00000411761 986 ntBASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 RPS6P23-201ENST00000413224 722 ntBASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 RNF10P1-201ENST00000418589 369 ntBASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC138832.1-201ENST00000522871 556 ntBASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 GTF2IP11-201ENST00000526931 420 ntBASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 AGGF1P7-201ENST00000562369 913 ntBASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 H3F3BP2-201ENST00000583907 357 ntBASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL353729.2-201ENST00000605859 1249 ntBASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC008833.1-201ENST00000611633 691 ntBASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL139407.1-201ENST00000613826 1175 ntBASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC012078.1-201ENST00000405035 1646 ntBASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TMX2-CTNND1H3BSU7 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC009962.1-201ENST00000567327 3813 ntBASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 MFSD8-219ENST00000641228 2559 ntBASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL358178.1-201ENST00000407698 397 ntBASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 FAM96AP1-201ENST00000430879 482 ntBASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL772161.1-201ENST00000439130 476 ntBASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.36□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC105399.1-202ENST00000447303 205 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms