Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 AL589994.1-201ENST00000404962 340 ntBASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 SSR1P2-201ENST00000415208 787 ntBASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 BMS1P13-201ENST00000417301 885 ntBASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 NPM1P26-201ENST00000426339 738 ntBASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 NPM1P18-201ENST00000434232 732 ntBASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 MTND2P40-201ENST00000436718 841 ntBASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 AL035090.1-201ENST00000454835 332 ntBASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 AC084754.1-201ENST00000463466 464 ntBASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 SNORA43.3-201ENST00000517240 103 ntBASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 AC103833.1-201ENST00000517442 172 ntBASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 AL359715.3-201ENST00000569267 2123 ntBASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 AL049840.6-201ENST00000604583 345 ntBASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 AL121652.1-201ENST00000608851 448 ntBASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 AC079298.2-201ENST00000623885 459 ntBASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 AC136428.4-201ENST00000634254 1155 ntBASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 AP001153.1-201ENST00000641024 338 ntBASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 OR8A1-204ENST00000642111 1145 ntBASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 LINC02019-201ENST00000608605 2060 ntBASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.85□□□□□ -1.47
TCRBV5S1A1TA0A578 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 CASC19-260ENST00000641828 2001 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 RNA5SP514-201ENST00000363717 111 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 BMS1P17-202ENST00000416720 316 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 RPS26P41-201ENST00000450370 284 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 LRRC37A14P-201ENST00000452297 462 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 VDAC2P4-201ENST00000452925 711 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 AP002345.1-201ENST00000456493 928 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 AL139824.2-201ENST00000458731 1095 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 OR9N1P-202ENST00000494289 481 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 PSMA2P2-201ENST00000504319 686 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 HMGB1P47-201ENST00000511281 589 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 SOX5P1-201ENST00000524155 1127 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 AL132657.2-201ENST00000564417 358 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 AC233266.2-201ENST00000567067 528 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 AC023762.1-201ENST00000603280 584 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 AL445435.1-201ENST00000604232 665 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 AC108359.1-201ENST00000616451 1211 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms