Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RN7SL197P-201ENST00000466981 299 ntBASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 CBX1P5-201ENST00000475330 559 ntBASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 HNRNPCP1-201ENST00000556181 766 ntBASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 AC011447.4-201ENST00000587562 111 ntBASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 AC009597.2-201ENST00000604659 592 ntBASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 MIR6133-201ENST00000617057 108 ntBASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SMIM28A0A1B0GU29 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 HSPA8P18-201ENST00000439846 1928 ntBASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 RNA5SP90-201ENST00000364801 99 ntBASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 MIR1182-201ENST00000408363 97 ntBASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 NPM1P25-201ENST00000429734 854 ntBASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 AC124944.2-201ENST00000429866 1242 ntBASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 PSMD10P3-201ENST00000437000 448 ntBASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 AC114982.2-201ENST00000461396 358 ntBASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 RN7SL826P-201ENST00000479724 288 ntBASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 RN7SKP66-201ENST00000516681 231 ntBASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 SEPT10P1-201ENST00000517342 1162 ntBASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 DPPA3P2-201ENST00000553589 478 ntBASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 AC008814.1-201ENST00000603797 406 ntBASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 AL034374.2-201ENST00000605281 548 ntBASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 AP002799.1-201ENST00000623552 423 ntBASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMIM28A0A1B0GU29 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 CLUHP1-201ENST00000435012 1190 ntBASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 NOP56P2-201ENST00000447491 769 ntBASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 ABCC13-202ENST00000463099 3842 ntBASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 EIF3KP3-201ENST00000514461 639 ntBASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 MIR7853-201ENST00000584820 132 ntBASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 AL138960.1-201ENST00000613838 513 ntBASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 AC090510.2-201ENST00000617465 629 ntBASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 AC135068.12-201ENST00000637370 931 ntBASIC5.65□□□□□ -1.5
SMIM28A0A1B0GU29 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SMIM28A0A1B0GU29 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SMIM28A0A1B0GU29 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms