Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.7□□□□□ -1.34
SCN11AQ9UI33 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.7□□□□□ -1.34
SCN11AQ9UI33 CR381572.2-201ENST00000624852 397 ntBASIC6.7□□□□□ -1.34
SCN11AQ9UI33 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.7□□□□□ -1.34
SCN11AQ9UI33 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
SCN11AQ9UI33 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SCN11AQ9UI33 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.7□□□□□ -1.34
SCN11AQ9UI33 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.7□□□□□ -1.34
SCN11AQ9UI33 BX284613.1-201ENST00000452221 1641 ntBASIC6.7□□□□□ -1.34
SCN11AQ9UI33 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SCN11AQ9UI33 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.7□□□□□ -1.34
SCN11AQ9UI33 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.7□□□□□ -1.34
SCN11AQ9UI33 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SCN11AQ9UI33 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SCN11AQ9UI33 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SCN11AQ9UI33 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.7□□□□□ -1.34
SCN11AQ9UI33 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 RPL10P10-201ENST00000403509 664 ntBASIC6.69□□□□□ -1.34
SCN11AQ9UI33 SNORA77-201ENST00000408716 125 ntBASIC6.69□□□□□ -1.34
SCN11AQ9UI33 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 AL590399.4-201ENST00000436561 601 ntBASIC6.69□□□□□ -1.34
SCN11AQ9UI33 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 RPS24P16-201ENST00000497294 392 ntBASIC6.69□□□□□ -1.34
SCN11AQ9UI33 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 AC068790.7-201ENST00000602347 528 ntBASIC6.69□□□□□ -1.34
SCN11AQ9UI33 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 OR9K1P-202ENST00000641111 3217 ntBASIC6.69□□□□□ -1.34
SCN11AQ9UI33 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 OR8V1P-201ENST00000395193 873 ntBASIC6.69□□□□□ -1.34
SCN11AQ9UI33 GAPDHP15-201ENST00000398586 975 ntBASIC6.69□□□□□ -1.34
SCN11AQ9UI33 AL590139.1-201ENST00000416267 400 ntBASIC6.69□□□□□ -1.34
SCN11AQ9UI33 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 BX276092.6-201ENST00000430476 250 ntBASIC6.69□□□□□ -1.34
SCN11AQ9UI33 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 BX276092.8-201ENST00000455722 250 ntBASIC6.69□□□□□ -1.34
SCN11AQ9UI33 AC096741.1-201ENST00000472250 846 ntBASIC6.69□□□□□ -1.34
SCN11AQ9UI33 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 AC234771.5-201ENST00000600161 514 ntBASIC6.69□□□□□ -1.34
SCN11AQ9UI33 AC098935.2-201ENST00000604222 466 ntBASIC6.69□□□□□ -1.34
SCN11AQ9UI33 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SCN11AQ9UI33 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SCN11AQ9UI33 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.68□□□□□ -1.34
SCN11AQ9UI33 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SCN11AQ9UI33 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SCN11AQ9UI33 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SCN11AQ9UI33 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
SCN11AQ9UI33 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SCN11AQ9UI33 HMGB3P7-201ENST00000400214 611 ntBASIC6.68□□□□□ -1.34
SCN11AQ9UI33 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.68□□□□□ -1.34
SCN11AQ9UI33 RPL31P44-201ENST00000447680 377 ntBASIC6.68□□□□□ -1.34
SCN11AQ9UI33 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.68□□□□□ -1.34
SCN11AQ9UI33 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.68□□□□□ -1.34
SCN11AQ9UI33 AC012400.1-201ENST00000518452 381 ntBASIC6.68□□□□□ -1.34
SCN11AQ9UI33 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.68□□□□□ -1.34
SCN11AQ9UI33 AC005000.1-201ENST00000536192 288 ntBASIC6.68□□□□□ -1.34
SCN11AQ9UI33 AC105129.1-201ENST00000560250 297 ntBASIC6.68□□□□□ -1.34
SCN11AQ9UI33 AC010632.3-201ENST00000611377 369 ntBASIC6.68□□□□□ -1.34
SCN11AQ9UI33 MIR7641-1-201ENST00000627518 61 ntBASIC6.68□□□□□ -1.34
SCN11AQ9UI33 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC6.68□□□□□ -1.34
SCN11AQ9UI33 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.68□□□□□ -1.34
SCN11AQ9UI33 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SCN11AQ9UI33 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.68□□□□□ -1.34
SCN11AQ9UI33 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.68□□□□□ -1.34
SCN11AQ9UI33 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SCN11AQ9UI33 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
SCN11AQ9UI33 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SCN11AQ9UI33 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SCN11AQ9UI33 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SCN11AQ9UI33 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms