Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 TRAV35-201ENST00000390462 330 ntBASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 AC007161.1-204ENST00000423039 460 ntBASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 RPL5P25-201ENST00000441148 775 ntBASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 COPS8P2-201ENST00000473228 627 ntBASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 SUMO2P4-201ENST00000504193 276 ntBASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 AC024558.1-201ENST00000505008 528 ntBASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 AC027308.1-201ENST00000517993 110 ntBASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 PMS2P3-207ENST00000529061 717 ntBASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 AC016180.1-201ENST00000567945 403 ntBASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 OR7E18P-201ENST00000592589 702 ntBASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 AL022394.1-201ENST00000606979 292 ntBASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
CLIP2Q9UDT6 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 AC104964.3-201ENST00000606115 2860 ntBASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 AL121886.1-201ENST00000358609 435 ntBASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 AL390774.1-201ENST00000411924 246 ntBASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 AP000534.2-201ENST00000412729 568 ntBASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 AC079809.1-201ENST00000415468 276 ntBASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 AC092106.1-201ENST00000444291 373 ntBASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 RPS26P41-201ENST00000450370 284 ntBASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 DEFB109A-201ENST00000482450 265 ntBASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 PGAM1P13-201ENST00000507497 754 ntBASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 BLZF2P-201ENST00000553776 1130 ntBASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 AC004808.2-201ENST00000627965 773 ntBASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 SAMMSON-209ENST00000641222 1100 ntBASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CLIP2Q9UDT6 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CLIP2Q9UDT6 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
CLIP2Q9UDT6 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 MYO5BP2-201ENST00000449815 1277 ntBASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 AC026348.1-201ENST00000462549 1053 ntBASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 AC090589.1-201ENST00000473109 362 ntBASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 RN7SL799P-201ENST00000475891 298 ntBASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 AC021733.2-201ENST00000518830 497 ntBASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 AC007066.2-202ENST00000566531 914 ntBASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 AP005403.1-201ENST00000579720 229 ntBASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 H3F3BP2-201ENST00000583907 357 ntBASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 AC007938.2-201ENST00000604666 2634 ntBASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 MIR6719-201ENST00000622428 87 ntBASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms