Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 LDHBP2-201ENST00000456969 1005 ntBASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 HAUS1P1-201ENST00000505275 832 ntBASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 SEPT10P1-201ENST00000517342 1162 ntBASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 OR4A17P-201ENST00000526032 904 ntBASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 H3F3BP2-201ENST00000583907 357 ntBASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 AL352984.2-201ENST00000611153 546 ntBASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 AL118556.2-201ENST00000614375 824 ntBASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 AC008115.3-201ENST00000614874 549 ntBASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 AC107308.1-201ENST00000615897 301 ntBASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 MIR6133-201ENST00000617057 108 ntBASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 AC092159.4-201ENST00000624944 550 ntBASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 AC016745.2-201ENST00000608834 3443 ntBASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BLOC1S4Q9NUP1 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 AL359715.3-201ENST00000569267 2123 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 SNORA16A-201ENST00000384342 137 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 AL034403.1-201ENST00000399414 885 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 RPL7P56-201ENST00000429441 717 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 MRPS33P4-201ENST00000434892 317 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 MED28P3-201ENST00000444288 531 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 AL035090.1-201ENST00000454835 332 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 RPS27AP2-201ENST00000457576 465 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 RN7SL273P-201ENST00000481561 299 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 HMGB1P47-201ENST00000511281 589 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 AC091912.1-201ENST00000511351 248 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 NRBF2P4-201ENST00000520874 850 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 MIR4505-201ENST00000582238 73 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 AC008521.2-201ENST00000591021 259 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 MIMT1-201ENST00000597105 1050 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 SNX6P1-201ENST00000601728 1224 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 AC009237.12-201ENST00000604755 742 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 AL139124.1-201ENST00000609123 421 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 AC239803.2-201ENST00000610161 430 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 AL118522.2-201ENST00000616045 615 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 AC127024.6-201ENST00000621598 424 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 AC019080.5-201ENST00000624891 757 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 AC110792.3-201ENST00000595906 1614 ntBASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
BLOC1S4Q9NUP1 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms