Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 MTCO1P52-201ENST00000433928 531 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 MTCO1P19-201ENST00000443487 500 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 GAPDHP20-201ENST00000444107 1007 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 CCNJP1-201ENST00000450600 1149 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC073476.1-201ENST00000452854 407 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC069528.1-202ENST00000482888 637 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 RPL5P33-201ENST00000487833 905 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC021146.8-201ENST00000507455 733 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 SEPT10P1-201ENST00000517342 1162 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 OR5G4P-201ENST00000525251 760 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 DEFB130C-202ENST00000530001 230 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 ASB8-207ENST00000536953 923 ntTSL 2 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 CHEK2P2-201ENST00000554701 672 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC002400.1-201ENST00000569310 726 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC024267.2-201ENST00000582737 417 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 VN1R90P-201ENST00000595717 726 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AF131215.7-201ENST00000602443 707 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 OR2BH1P-201ENST00000608850 864 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 MIR6885-201ENST00000612241 66 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC015660.5-201ENST00000623238 564 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AL929601.4-201ENST00000613011 1341 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC006042.3-201ENST00000454684 1469 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC079753.1-201ENST00000623243 3868 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 AC012020.1-201ENST00000624541 1728 ntBASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.88□□□□□ -1.47
SEC61A2Q9H9S3 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 RNA5SP333-201ENST00000363466 118 ntBASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 RNA5SP334-201ENST00000364825 118 ntBASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 RNU5E-4P-201ENST00000364931 120 ntBASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 RNU6-157P-201ENST00000383957 107 ntBASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 RNU6-413P-201ENST00000384115 107 ntBASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 CDC42P6-201ENST00000421246 576 ntBASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 AL589794.1-201ENST00000424971 390 ntBASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 AC005189.1-201ENST00000431286 310 ntBASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 RPS24P1-201ENST00000438550 371 ntBASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 AL354941.1-201ENST00000438600 464 ntBASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 MTCYBP42-201ENST00000444653 1130 ntBASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.87□□□□□ -1.47
SEC61A2Q9H9S3 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms