Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 CASKP1-201ENST00000412870 582 ntBASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 RPS26P4-201ENST00000431743 355 ntBASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 HMGN1P32-201ENST00000441744 256 ntBASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 AC022795.1-201ENST00000473808 480 ntBASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 H3F3AP5-201ENST00000475267 429 ntBASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 RPL9P15-201ENST00000491096 532 ntBASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 SUMO2P4-201ENST00000504193 276 ntBASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 RNU6-1334P-201ENST00000516032 105 ntBASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 RNU6-551P-201ENST00000516661 103 ntBASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 AC027308.1-201ENST00000517993 110 ntBASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 AC138473.1-201ENST00000605717 526 ntBASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 U91328.4-201ENST00000608919 517 ntBASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 AC097505.1-201ENST00000610199 565 ntBASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.46□□□□□ -1.54
VIPAS39Q9H9C1 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 MTCO1P22-201ENST00000604619 1360 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 AC097461.1-201ENST00000568928 2821 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 SNORA64.1-201ENST00000362600 132 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 PSMA6P1-201ENST00000400275 741 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 VN1R20P-201ENST00000425215 966 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 NAP1L4P2-201ENST00000425958 899 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 WDR82P2-201ENST00000444540 928 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 MTCYBP14-201ENST00000457471 715 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 AL122020.1-201ENST00000472287 459 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 RN7SL790P-201ENST00000474043 298 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 RN7SL502P-201ENST00000481857 290 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 AC147055.1-201ENST00000509261 750 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 SETP21-201ENST00000514799 892 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 AC131935.1-201ENST00000524621 333 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 AC027796.1-201ENST00000575593 512 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 AP005403.1-201ENST00000579720 229 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 AC089999.3-201ENST00000622440 577 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 RBPJP2-201ENST00000618187 1444 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.45□□□□□ -1.54
VIPAS39Q9H9C1 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VIPAS39Q9H9C1 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.44□□□□□ -1.54
VIPAS39Q9H9C1 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VIPAS39Q9H9C1 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.44□□□□□ -1.54
VIPAS39Q9H9C1 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.44□□□□□ -1.54
VIPAS39Q9H9C1 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
VIPAS39Q9H9C1 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms