Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USB1Q9BQ65 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USB1Q9BQ65 ZNF383-208ENST00000590503 1673 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USB1Q9BQ65 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 AL136140.2-201ENST00000624717 1705 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC7.44□□□□□ -1.22
USB1Q9BQ65 AL359396.1-201ENST00000623151 2376 ntBASIC7.44□□□□□ -1.22
USB1Q9BQ65 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
USB1Q9BQ65 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USB1Q9BQ65 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
USB1Q9BQ65 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USB1Q9BQ65 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 NAMPTP1-201ENST00000440465 2514 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
USB1Q9BQ65 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 NACA-216ENST00000550952 2922 ntTSL 2 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 Y_RNA.187-201ENST00000363918 113 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USB1Q9BQ65 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 CST11-201ENST00000377007 461 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
USB1Q9BQ65 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
USB1Q9BQ65 IGLV11-55-201ENST00000390286 381 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USB1Q9BQ65 AL583835.1-201ENST00000399570 407 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 AC111200.2-201ENST00000418877 505 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 RGS17P1-201ENST00000423358 553 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 VDAC1P2-201ENST00000423609 850 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 AC019097.1-201ENST00000424783 735 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
USB1Q9BQ65 RPS10P2-201ENST00000430953 494 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 RPS3AP54-201ENST00000435535 734 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 AC092106.2-201ENST00000436597 487 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 AMYP1-201ENST00000440059 1023 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 PRPF38AP1-201ENST00000451976 933 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 AL645937.3-201ENST00000453647 936 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 GAPDHP28-201ENST00000455134 1003 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 CEACAMP4-201ENST00000457676 421 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 OR9A3P-202ENST00000485185 878 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 GNGT2-205ENST00000511673 500 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USB1Q9BQ65 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 IGLV7-35-201ENST00000523314 340 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 OR4R1P-201ENST00000529879 463 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 TMEM269-202ENST00000536543 983 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 AC018653.2-201ENST00000540190 238 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 AL161670.1-201ENST00000554348 137 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 AC009997.1-201ENST00000557862 129 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 MIR5186-201ENST00000577504 120 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 RN7SL49P-201ENST00000581392 298 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 AC009686.2-201ENST00000607017 577 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 CDC37L1-AS1-201ENST00000607997 463 ntTSL 5 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 5_8S_rRNA.2-201ENST00000612732 151 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 RN7SL796P-201ENST00000613991 291 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 uc_338.15-201ENST00000615470 191 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 Metazoa_SRP.29-201ENST00000616220 280 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 MIR7156-201ENST00000620979 60 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 AC099494.2-201ENST00000623371 978 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 AC022418.1-201ENST00000624118 445 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 AC135068.12-201ENST00000637370 931 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 SALL4P7-201ENST00000555779 3120 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 TTC39A-212ENST00000447632 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
USB1Q9BQ65 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USB1Q9BQ65 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USB1Q9BQ65 KIF4B-201ENST00000435029 4378 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 ADGRF2-201ENST00000296862 2127 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
USB1Q9BQ65 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
USB1Q9BQ65 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
USB1Q9BQ65 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 AC013488.1-201ENST00000526618 1838 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 AC217777.1-201ENST00000570034 1471 ntBASIC7.43□□□□□ -1.22
USB1Q9BQ65 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
USB1Q9BQ65 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 DTNA-233ENST00000601125 1931 ntTSL 2 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 AC018682.1-201ENST00000506009 1519 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
USB1Q9BQ65 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.42□□□□□ -1.22
USB1Q9BQ65 LACTB2-AS1-201ENST00000499227 3716 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms