Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 RNU1-55P-201ENST00000365510 158 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 ARSFP1-201ENST00000398758 477 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 DNAJA1P2-201ENST00000421360 1197 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 DPRXP1-201ENST00000426312 460 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 KCTD9P1-201ENST00000430462 1167 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC091390.2-201ENST00000432573 374 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 ATP5F1P1-201ENST00000433775 569 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 Z74696.2-201ENST00000436514 498 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AL138787.1-202ENST00000437804 898 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC234771.4-201ENST00000441416 730 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AL121578.2-201ENST00000448797 447 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 RPL5P12-201ENST00000477071 851 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC037198.2-201ENST00000478845 733 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 RPL7P18-201ENST00000478965 734 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 RPL34P33-201ENST00000486062 334 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC073358.1-201ENST00000505671 684 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC008837.2-201ENST00000513076 418 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 HNRNPKP5-201ENST00000515300 253 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 RNU6-1178P-201ENST00000516674 107 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AP002963.1-201ENST00000530590 184 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC007068.2-201ENST00000543168 395 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC011260.1-201ENST00000578420 472 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 BNIP3P26-201ENST00000600827 554 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC099676.1-201ENST00000608886 657 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC010333.3-201ENST00000615100 402 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AL607023.1-201ENST00000620045 248 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AL138693.1-201ENST00000622219 129 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC005514.1-201ENST00000623521 208 ntBASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PTCHD1Q96NR3 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.34□□□□□ -1.4
PTCHD1Q96NR3 AC093278.2-201ENST00000564956 2485 ntBASIC6.34□□□□□ -1.4
PTCHD1Q96NR3 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.34□□□□□ -1.4
PTCHD1Q96NR3 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.34□□□□□ -1.4
PTCHD1Q96NR3 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.34□□□□□ -1.4
PTCHD1Q96NR3 AP005901.5-201ENST00000545779 1796 ntBASIC6.34□□□□□ -1.4
PTCHD1Q96NR3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 CASC19-206ENST00000641028 1430 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC010132.4-201ENST00000569883 1368 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms