Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC073333.2-201ENST00000603589 769 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 RFPL4AP6-201ENST00000616792 846 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 AP003485.2-201ENST00000623636 610 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 SNX18P12-201ENST00000624821 759 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.76□□□□□ -1.33
ERCC4Q92889 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC6.76□□□□□ -1.33
ERCC4Q92889 AC000095.2-202ENST00000637415 154 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 OR8A1-204ENST00000642111 1145 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC4Q92889 MTND5P31-201ENST00000419366 1374 ntBASIC6.76□□□□□ -1.33
ERCC4Q92889 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.76□□□□□ -1.33
ERCC4Q92889 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.76□□□□□ -1.33
ERCC4Q92889 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
ERCC4Q92889 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC4Q92889 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC4Q92889 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.76□□□□□ -1.33
ERCC4Q92889 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC4Q92889 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC4Q92889 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC4Q92889 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC4Q92889 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
ERCC4Q92889 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
ERCC4Q92889 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC4Q92889 AC010266.2-201ENST00000564741 3255 ntBASIC6.75□□□□□ -1.33
ERCC4Q92889 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC4Q92889 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
ERCC4Q92889 OR10R3P-201ENST00000361688 942 ntBASIC6.75□□□□□ -1.33
ERCC4Q92889 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC4Q92889 VN1R20P-201ENST00000425215 966 ntBASIC6.75□□□□□ -1.33
ERCC4Q92889 CUBNP2-201ENST00000443534 1139 ntBASIC6.75□□□□□ -1.33
ERCC4Q92889 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC6.75□□□□□ -1.33
ERCC4Q92889 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.75□□□□□ -1.33
ERCC4Q92889 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.75□□□□□ -1.33
ERCC4Q92889 AC098818.1-201ENST00000478593 252 ntBASIC6.75□□□□□ -1.33
ERCC4Q92889 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.75□□□□□ -1.33
ERCC4Q92889 AC008410.1-201ENST00000483777 339 ntBASIC6.75□□□□□ -1.33
ERCC4Q92889 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.75□□□□□ -1.33
ERCC4Q92889 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.75□□□□□ -1.33
ERCC4Q92889 HMGN1P16-201ENST00000508308 283 ntBASIC6.75□□□□□ -1.33
ERCC4Q92889 AC097486.1-201ENST00000515331 210 ntBASIC6.75□□□□□ -1.33
ERCC4Q92889 SNORA19.3-201ENST00000516165 130 ntBASIC6.75□□□□□ -1.33
ERCC4Q92889 Vault.2-201ENST00000516519 98 ntBASIC6.75□□□□□ -1.33
ERCC4Q92889 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC6.75□□□□□ -1.33
ERCC4Q92889 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.75□□□□□ -1.33
ERCC4Q92889 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC6.75□□□□□ -1.33
ERCC4Q92889 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC4Q92889 AC036111.2-201ENST00000533247 901 ntBASIC6.75□□□□□ -1.33
ERCC4Q92889 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.75□□□□□ -1.33
ERCC4Q92889 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC4Q92889 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC4Q92889 AC025918.2-201ENST00000558683 763 ntBASIC6.75□□□□□ -1.33
ERCC4Q92889 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC6.75□□□□□ -1.33
ERCC4Q92889 AL359715.3-201ENST00000569267 2123 ntBASIC6.75□□□□□ -1.33
ERCC4Q92889 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.75□□□□□ -1.33
ERCC4Q92889 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.75□□□□□ -1.33
ERCC4Q92889 AC005034.4-201ENST00000603612 899 ntBASIC6.75□□□□□ -1.33
ERCC4Q92889 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.75□□□□□ -1.33
ERCC4Q92889 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
ERCC4Q92889 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC6.75□□□□□ -1.33
ERCC4Q92889 AC006927.2-201ENST00000639256 389 ntBASIC6.75□□□□□ -1.33
ERCC4Q92889 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC4Q92889 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC4Q92889 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC4Q92889 AL137141.1-201ENST00000624622 4836 ntBASIC6.75□□□□□ -1.33
ERCC4Q92889 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC4Q92889 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
ERCC4Q92889 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC4Q92889 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
ERCC4Q92889 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
ERCC4Q92889 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
ERCC4Q92889 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ERCC4Q92889 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.74□□□□□ -1.33
ERCC4Q92889 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.74□□□□□ -1.33
ERCC4Q92889 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ERCC4Q92889 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
ERCC4Q92889 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ERCC4Q92889 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ERCC4Q92889 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.74□□□□□ -1.33
ERCC4Q92889 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ERCC4Q92889 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ERCC4Q92889 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.74□□□□□ -1.33
ERCC4Q92889 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.74□□□□□ -1.33
ERCC4Q92889 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
ERCC4Q92889 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ERCC4Q92889 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
ERCC4Q92889 SNORD1C-201ENST00000363315 78 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 RNU105B-201ENST00000364478 208 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ERCC4Q92889 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
ERCC4Q92889 AC245096.1-201ENST00000413104 546 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 RAB9AP4-201ENST00000415230 609 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.74□□□□□ -1.33
ERCC4Q92889 AL354868.1-201ENST00000417077 482 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.74□□□□□ -1.33
ERCC4Q92889 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ERCC4Q92889 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.74□□□□□ -1.33
ERCC4Q92889 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.74□□□□□ -1.33
ERCC4Q92889 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ERCC4Q92889 LINC00328-2P-201ENST00000436585 219 ntBASIC6.74□□□□□ -1.33
ERCC4Q92889 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms