Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
CLIP4Q8N3C7 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
CLIP4Q8N3C7 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 RPL11P3-201ENST00000395256 523 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 RN7SKP29-201ENST00000410957 272 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 AC096644.3-201ENST00000416788 338 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 RCC2P2-201ENST00000422174 918 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 DEFA9P-201ENST00000433042 285 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 AC092106.1-201ENST00000444291 373 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 CFL1P4-201ENST00000451536 498 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 MTATP6P14-201ENST00000455189 673 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 AC093166.4-201ENST00000457867 318 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 RN7SL193P-201ENST00000491708 276 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 AC023424.1-201ENST00000496058 459 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 AC034244.2-201ENST00000514668 858 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 VTA1P2-201ENST00000520205 911 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 IGKV2-4-201ENST00000523070 340 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 ZNF322P1-201ENST00000568013 1209 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 MTATP6P2-201ENST00000603319 678 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 AC135178.6-201ENST00000605314 398 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 HIRAP1-201ENST00000605318 787 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 CR589904.2-201ENST00000612533 440 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 AL163051.2-201ENST00000618976 735 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 AC010608.3-201ENST00000625048 527 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 AL356118.1-201ENST00000635272 1078 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 LYARP1-201ENST00000436977 1501 ntBASIC5.33□□□□□ -1.56
CLIP4Q8N3C7 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AC117409.1-201ENST00000470499 1310 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 COX6B1P3-201ENST00000312310 260 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AMZ2P2-201ENST00000406819 1057 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AC069282.1-201ENST00000411911 526 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 TUBB4BP6-201ENST00000437576 479 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 MTND1P26-201ENST00000440488 538 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AC093166.3-201ENST00000448785 303 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 PPIAP27-201ENST00000453800 265 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 RPS3AP53-201ENST00000454716 778 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AC078857.1-201ENST00000469870 667 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AC099521.1-201ENST00000482557 334 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 RPL9P15-201ENST00000491096 532 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 EIF4E2P2-201ENST00000492033 736 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms