Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PACS2Q86VP3 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PACS2Q86VP3 HYDIN2-203ENST00000614586 13885 ntBASIC8.12□□□□□ -1.11
PACS2Q86VP3 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PACS2Q86VP3 OR1S1-202ENST00000641544 1474 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PACS2Q86VP3 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PACS2Q86VP3 AC009831.5-201ENST00000624000 3189 ntBASIC8.12□□□□□ -1.11
PACS2Q86VP3 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PACS2Q86VP3 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
PACS2Q86VP3 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
PACS2Q86VP3 AL049840.1-201ENST00000498989 1404 ntTSL 4 BASIC8.12□□□□□ -1.11
PACS2Q86VP3 GTF2H2B-203ENST00000508065 1432 ntBASIC8.12□□□□□ -1.11
PACS2Q86VP3 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
PACS2Q86VP3 AL451064.2-201ENST00000623514 1654 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PACS2Q86VP3 CLCN3P1-202ENST00000609203 1944 ntTSL 2 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PACS2Q86VP3 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PACS2Q86VP3 AL080317.3-201ENST00000607434 4315 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PACS2Q86VP3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PACS2Q86VP3 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 SPATA2P1-201ENST00000431223 2055 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 SLC7A8-206ENST00000469263 3557 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PACS2Q86VP3 ST3GAL3-211ENST00000361812 513 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PACS2Q86VP3 RNU4-20P-201ENST00000365601 151 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 CST9LP1-201ENST00000376987 444 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 DEFB109C-201ENST00000382575 264 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 DEFB109B-201ENST00000382656 264 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 RNU6-769P-201ENST00000384407 104 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 RNU6-831P-201ENST00000384548 107 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 TRBV23OR9-2-201ENST00000390389 335 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 MIR320C1-201ENST00000408566 88 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 RN7SKP232-201ENST00000410170 290 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 RNU4-14P-201ENST00000410858 122 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 SNRPGP11-201ENST00000411777 232 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 RPLP1P10-201ENST00000413972 339 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
PACS2Q86VP3 RPL12P27-201ENST00000414870 496 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 AL590806.1-201ENST00000415818 853 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PACS2Q86VP3 MRLN-202ENST00000430431 495 ntAPPRIS P2 TSL 2 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 AL159166.1-201ENST00000437430 329 ntTSL 3 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 AC006335.2-201ENST00000437993 330 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 AMYP1-201ENST00000440059 1023 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 AC006463.1-201ENST00000445929 232 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 AL445189.2-201ENST00000447543 259 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 FTH1P7-201ENST00000450676 552 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 AL645937.3-201ENST00000453647 936 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 AL357874.2-201ENST00000457044 679 ntTSL 3 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 RN7SL580P-201ENST00000492489 287 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 RPL38P4-201ENST00000502376 214 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 RNU6-388P-201ENST00000517012 105 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 RNU6-389P-201ENST00000517048 105 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 GTF2IP11-201ENST00000526931 420 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 AP000916.2-201ENST00000528904 286 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 GNG2-215ENST00000557376 573 ntTSL 4 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 AC244034.2-201ENST00000562504 509 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 AC233702.4-201ENST00000581610 304 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 ZNF780B-206ENST00000598845 401 ntTSL 3 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 AC008782.1-201ENST00000603386 430 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 AL390240.1-201ENST00000612950 384 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 RN7SL575P-201ENST00000620774 299 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 AL355987.5-201ENST00000621585 411 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 AC022507.1-201ENST00000548349 1505 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 AC093297.3-201ENST00000607056 2517 ntBASIC8.11□□□□□ -1.11
PACS2Q86VP3 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PACS2Q86VP3 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PACS2Q86VP3 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
PACS2Q86VP3 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
PACS2Q86VP3 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 XIST-211ENST00000635841 1734 ntTSL 5 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
PACS2Q86VP3 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PACS2Q86VP3 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PACS2Q86VP3 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
PACS2Q86VP3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PACS2Q86VP3 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC8.1□□□□□ -1.11
PACS2Q86VP3 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PACS2Q86VP3 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms