Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 OR11H2-202ENST00000641517 1085 ntBASIC5.21□□□□□ -1.58
SHFQ7M4L6 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHFQ7M4L6 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHFQ7M4L6 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHFQ7M4L6 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHFQ7M4L6 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHFQ7M4L6 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHFQ7M4L6 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SHFQ7M4L6 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHFQ7M4L6 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHFQ7M4L6 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHFQ7M4L6 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHFQ7M4L6 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHFQ7M4L6 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHFQ7M4L6 RNU6-1000P-201ENST00000391066 106 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHFQ7M4L6 AL391422.1-201ENST00000402155 436 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 RPL10P10-201ENST00000403509 664 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 MTATP6P31-201ENST00000406985 692 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 RPS4XP5-201ENST00000419038 768 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 RNGTTP1-201ENST00000420965 728 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHFQ7M4L6 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 LINC00328-2P-201ENST00000436585 219 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 AC023271.1-201ENST00000445936 1090 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 AL445466.1-201ENST00000448432 357 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 PPIAP7-201ENST00000454070 489 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 CEACAMP11-201ENST00000455211 583 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 RN7SL254P-201ENST00000460609 284 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 ABCC13-202ENST00000463099 3842 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 RPSAP39-201ENST00000467439 883 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 AL157777.1-201ENST00000468100 304 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHFQ7M4L6 RN7SL362P-201ENST00000494228 267 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 RPSAP51-201ENST00000497462 645 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 AC105420.1-201ENST00000504389 582 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 AC010460.2-201ENST00000509054 677 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 ASNSP4-201ENST00000511103 447 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 AP000620.1-201ENST00000527147 504 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 OR8X1P-201ENST00000534542 869 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 AL359219.2-201ENST00000555184 348 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 CD24P2-201ENST00000565486 219 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 MIR4701-201ENST00000583094 63 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHFQ7M4L6 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 AC068620.3-201ENST00000602749 560 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 AC034236.3-201ENST00000605999 461 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 AL135999.3-201ENST00000610501 812 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 AL050303.3-201ENST00000613704 284 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 AL139099.4-201ENST00000614802 114 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 AC004808.1-201ENST00000627671 721 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 TMEM30CP-203ENST00000637814 1035 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHFQ7M4L6 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHFQ7M4L6 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHFQ7M4L6 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHFQ7M4L6 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.2□□□□□ -1.58
SHFQ7M4L6 AL022311.1-201ENST00000623726 19416 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHFQ7M4L6 MAPK10-328ENST00000641553 4009 ntBASIC5.2□□□□□ -1.58
SHFQ7M4L6 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms