Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SSX9-201ENST00000376909 591 ntBASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 AL161631.1-201ENST00000417933 486 ntBASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 BRWD1-AS1-201ENST00000423274 691 ntTSL 4 BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 FDPSP6-201ENST00000425091 512 ntBASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 AC104843.2-201ENST00000427666 297 ntBASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 AL035458.1-201ENST00000433096 585 ntBASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 MTCYBP45-201ENST00000435243 565 ntBASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 RPS4XP4-201ENST00000443195 763 ntBASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 RN7SL335P-201ENST00000482790 304 ntBASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 GAPDHP61-201ENST00000507324 1005 ntBASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 AC091133.4-201ENST00000511142 308 ntBASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 RN7SKP141-201ENST00000516167 338 ntBASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 OR4A1P-201ENST00000532342 920 ntBASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 AC093027.1-201ENST00000546698 429 ntBASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 RN7SL473P-201ENST00000580341 299 ntBASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 AC069499.2-201ENST00000610665 382 ntBASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 AL359535.1-201ENST00000612100 1087 ntBASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 PTCHD3P1-201ENST00000612350 537 ntBASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 OR52B5P-202ENST00000641118 1110 ntBASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 AL353743.4-201ENST00000422653 1547 ntBASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 MTCO1P9-201ENST00000505577 1534 ntBASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 CASC19-206ENST00000641028 1430 ntBASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
FOXR1Q6PIV2 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AL355377.1-201ENST00000621125 1653 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 NAP1L4P1-201ENST00000319092 1157 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 Y_RNA.138-201ENST00000363462 102 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 Y_RNA.402-201ENST00000383972 102 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 SNORA7B-201ENST00000384360 139 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 RNA5SP23-201ENST00000391006 105 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 RPL24P7-201ENST00000399435 453 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 CALM2P3-201ENST00000400429 449 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AL356776.1-201ENST00000406574 447 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 RPS7P8-201ENST00000418311 581 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AL358942.1-201ENST00000418595 1178 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 VDAC2P3-201ENST00000430995 828 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 RN7SL549P-201ENST00000478997 282 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AC111000.3-201ENST00000508057 576 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 IGHV3-32-201ENST00000519182 355 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AP002453.2-201ENST00000533503 320 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 ARL2BPP2-201ENST00000550907 489 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 NPM1P5-201ENST00000557228 838 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AL133457.1-201ENST00000564251 987 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 EXOSC3P2-201ENST00000594464 497 ntBASIC7.51□□□□□ -1.21
FOXR1Q6PIV2 AL078623.1-201ENST00000602702 907 ntBASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 146.6 ms