Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.56□□□□□ -1.52
ZNF549Q6P9A3 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.56□□□□□ -1.52
ZNF549Q6P9A3 AL138895.2-201ENST00000603019 178 ntBASIC5.56□□□□□ -1.52
ZNF549Q6P9A3 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.56□□□□□ -1.52
ZNF549Q6P9A3 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.56□□□□□ -1.52
ZNF549Q6P9A3 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.56□□□□□ -1.52
ZNF549Q6P9A3 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
ZNF549Q6P9A3 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ZNF549Q6P9A3 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZNF549Q6P9A3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZNF549Q6P9A3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZNF549Q6P9A3 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
ZNF549Q6P9A3 AL137058.3-201ENST00000624531 3099 ntBASIC5.56□□□□□ -1.52
ZNF549Q6P9A3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AC091305.2-201ENST00000624049 1576 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 SRRM1P3-201ENST00000426911 2678 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 RPSAP35-201ENST00000413753 818 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 BMS1P13-201ENST00000417301 885 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AL354766.1-201ENST00000423396 542 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 MTCO2P1-201ENST00000424648 477 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 MTND4LP7-201ENST00000431728 294 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AL138899.2-201ENST00000439139 499 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 MTATP6P26-201ENST00000445926 662 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AZGP1P2-201ENST00000454506 345 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 MTND2P30-201ENST00000456663 382 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 MTCYBP14-201ENST00000457471 715 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 ATP5LP5-201ENST00000483050 299 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AC112198.4-201ENST00000515450 351 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AC139103.1-201ENST00000534696 1030 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AC135626.1-201ENST00000556983 435 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AL049874.4-201ENST00000557593 255 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AC027243.2-201ENST00000602530 724 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AL049840.6-201ENST00000604583 345 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AL356118.1-201ENST00000635272 1078 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AL445984.1-201ENST00000637834 659 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AC087565.3-203ENST00000641018 837 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AL034546.1-201ENST00000623740 3693 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 AC007938.2-201ENST00000604666 2634 ntBASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.55□□□□□ -1.52
ZNF549Q6P9A3 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 MIR375-201ENST00000362103 64 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 RNA5SP131-201ENST00000365452 119 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 MIR122-201ENST00000385044 85 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 AL353692.2-201ENST00000407054 335 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 PTGES3P2-201ENST00000407942 482 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 VPS26BP1-201ENST00000417155 755 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 MTND2P40-201ENST00000436718 841 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 MED28P3-201ENST00000444288 531 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms