Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
GABPAQ06546 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
GABPAQ06546 AC015799.1-201ENST00000622996 3122 ntBASIC6.26□□□□□ -1.41
GABPAQ06546 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
GABPAQ06546 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
GABPAQ06546 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.26□□□□□ -1.41
GABPAQ06546 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
GABPAQ06546 AC007159.1-201ENST00000566529 4706 ntBASIC6.26□□□□□ -1.41
GABPAQ06546 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
GABPAQ06546 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
GABPAQ06546 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
GABPAQ06546 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
GABPAQ06546 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
GABPAQ06546 RN7SKP125-201ENST00000410481 302 ntBASIC6.26□□□□□ -1.41
GABPAQ06546 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.26□□□□□ -1.41
GABPAQ06546 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.26□□□□□ -1.41
GABPAQ06546 AC073850.1-201ENST00000449243 255 ntBASIC6.26□□□□□ -1.41
GABPAQ06546 AC092647.2-201ENST00000452998 253 ntBASIC6.26□□□□□ -1.41
GABPAQ06546 AC109462.1-201ENST00000491087 368 ntBASIC6.26□□□□□ -1.41
GABPAQ06546 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.26□□□□□ -1.41
GABPAQ06546 AC111000.5-201ENST00000506559 1178 ntBASIC6.26□□□□□ -1.41
GABPAQ06546 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.26□□□□□ -1.41
GABPAQ06546 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.26□□□□□ -1.41
GABPAQ06546 AC110775.1-201ENST00000513721 462 ntBASIC6.26□□□□□ -1.41
GABPAQ06546 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.26□□□□□ -1.41
GABPAQ06546 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.26□□□□□ -1.41
GABPAQ06546 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.26□□□□□ -1.41
GABPAQ06546 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.26□□□□□ -1.41
GABPAQ06546 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.26□□□□□ -1.41
GABPAQ06546 OR7A8P-201ENST00000595427 913 ntBASIC6.26□□□□□ -1.41
GABPAQ06546 AC005252.1-201ENST00000604518 1063 ntBASIC6.26□□□□□ -1.41
GABPAQ06546 AC004948.1-201ENST00000609858 672 ntBASIC6.26□□□□□ -1.41
GABPAQ06546 AC090510.2-201ENST00000617465 629 ntBASIC6.26□□□□□ -1.41
GABPAQ06546 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
GABPAQ06546 AL121839.2-201ENST00000565058 6943 ntBASIC6.26□□□□□ -1.41
GABPAQ06546 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
GABPAQ06546 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
GABPAQ06546 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
GABPAQ06546 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
GABPAQ06546 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
GABPAQ06546 AC092747.4-201ENST00000620519 1861 ntBASIC6.26□□□□□ -1.41
GABPAQ06546 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.25□□□□□ -1.41
GABPAQ06546 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
GABPAQ06546 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
GABPAQ06546 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.25□□□□□ -1.41
GABPAQ06546 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
GABPAQ06546 HSPA8P18-201ENST00000439846 1928 ntBASIC6.25□□□□□ -1.41
GABPAQ06546 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
GABPAQ06546 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.25□□□□□ -1.41
GABPAQ06546 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.25□□□□□ -1.41
GABPAQ06546 SMC4P1-201ENST00000414479 527 ntBASIC6.25□□□□□ -1.41
GABPAQ06546 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
GABPAQ06546 RPS4XP16-201ENST00000427198 791 ntBASIC6.25□□□□□ -1.41
GABPAQ06546 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.25□□□□□ -1.41
GABPAQ06546 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.25□□□□□ -1.41
GABPAQ06546 AC147055.3-201ENST00000510547 851 ntBASIC6.25□□□□□ -1.41
GABPAQ06546 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.25□□□□□ -1.41
GABPAQ06546 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.25□□□□□ -1.41
GABPAQ06546 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.25□□□□□ -1.41
GABPAQ06546 AC008536.1-201ENST00000602872 669 ntBASIC6.25□□□□□ -1.41
GABPAQ06546 AC009163.6-201ENST00000612367 342 ntBASIC6.25□□□□□ -1.41
GABPAQ06546 AC010809.3-201ENST00000621310 641 ntBASIC6.25□□□□□ -1.41
GABPAQ06546 AC099494.2-201ENST00000623371 978 ntBASIC6.25□□□□□ -1.41
GABPAQ06546 AP002799.1-201ENST00000623552 423 ntBASIC6.25□□□□□ -1.41
GABPAQ06546 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.25□□□□□ -1.41
GABPAQ06546 MTCO1P46-201ENST00000451639 1491 ntBASIC6.25□□□□□ -1.41
GABPAQ06546 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
GABPAQ06546 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
GABPAQ06546 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
GABPAQ06546 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
GABPAQ06546 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.25□□□□□ -1.41
GABPAQ06546 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
GABPAQ06546 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
GABPAQ06546 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
GABPAQ06546 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
GABPAQ06546 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
GABPAQ06546 AC004076.2-201ENST00000620532 3323 ntBASIC6.25□□□□□ -1.41
GABPAQ06546 AC003973.3-201ENST00000624863 2822 ntBASIC6.25□□□□□ -1.41
GABPAQ06546 AC114947.2-201ENST00000565748 2125 ntBASIC6.25□□□□□ -1.41
GABPAQ06546 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.25□□□□□ -1.41
GABPAQ06546 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.24□□□□□ -1.41
GABPAQ06546 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GABPAQ06546 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
GABPAQ06546 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GABPAQ06546 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
GABPAQ06546 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
GABPAQ06546 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GABPAQ06546 SNX18P3-202ENST00000565670 1750 ntBASIC6.24□□□□□ -1.41
GABPAQ06546 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
GABPAQ06546 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
GABPAQ06546 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
GABPAQ06546 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
GABPAQ06546 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
GABPAQ06546 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
GABPAQ06546 MIR105-1-201ENST00000385222 81 ntBASIC6.24□□□□□ -1.41
GABPAQ06546 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
GABPAQ06546 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
GABPAQ06546 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.24□□□□□ -1.41
GABPAQ06546 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
GABPAQ06546 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms