Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 MIR7109-201ENST00000613748 65 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 AL591926.1-201ENST00000620542 217 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 uc_338.7-201ENST00000621834 124 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 AP001005.3-201ENST00000622049 129 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 AC025262.3-201ENST00000623666 360 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 OR8G3P-202ENST00000641572 1255 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 AC000123.3-201ENST00000624029 4975 ntBASIC4.21□□□□□ -1.74
HIST1H1AQ02539 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HIST1H1AQ02539 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 AL731532.2-201ENST00000623542 1953 ntBASIC4.2□□□□□ -1.74
HIST1H1AQ02539 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 AP000542.2-201ENST00000623199 6179 ntBASIC4.2□□□□□ -1.74
HIST1H1AQ02539 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 RN7SKP292-201ENST00000365522 317 ntBASIC4.2□□□□□ -1.74
HIST1H1AQ02539 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 TMX2P1-201ENST00000436507 708 ntBASIC4.2□□□□□ -1.74
HIST1H1AQ02539 AC110602.1-201ENST00000437414 318 ntBASIC4.2□□□□□ -1.74
HIST1H1AQ02539 THAP12P8-201ENST00000447914 2115 ntBASIC4.2□□□□□ -1.74
HIST1H1AQ02539 OR52E3P-201ENST00000452083 936 ntBASIC4.2□□□□□ -1.74
HIST1H1AQ02539 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 AP000797.2-201ENST00000475768 606 ntBASIC4.2□□□□□ -1.74
HIST1H1AQ02539 AC009120.1-201ENST00000493458 473 ntBASIC4.2□□□□□ -1.74
HIST1H1AQ02539 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 NENFP3-201ENST00000503735 313 ntBASIC4.2□□□□□ -1.74
HIST1H1AQ02539 DUTP7-201ENST00000507982 486 ntBASIC4.2□□□□□ -1.74
HIST1H1AQ02539 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 AC079064.1-201ENST00000528365 362 ntBASIC4.2□□□□□ -1.74
HIST1H1AQ02539 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 OR5AM1P-201ENST00000532136 1032 ntBASIC4.2□□□□□ -1.74
HIST1H1AQ02539 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 MIR4311-201ENST00000580794 100 ntBASIC4.2□□□□□ -1.74
HIST1H1AQ02539 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 MIR6780B-201ENST00000610307 79 ntBASIC4.2□□□□□ -1.74
HIST1H1AQ02539 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 AC087565.3-203ENST00000641018 837 ntBASIC4.2□□□□□ -1.74
HIST1H1AQ02539 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.2□□□□□ -1.74
HIST1H1AQ02539 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 MT-RNR2-201ENST00000387347 1559 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 NAMPTP1-201ENST00000440465 2514 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 RNA5SP433-201ENST00000364491 114 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 TRAV35-201ENST00000390462 330 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AL359643.1-201ENST00000404109 423 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 MIR1203-201ENST00000408812 85 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AL035660.1-201ENST00000422041 222 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AL022331.1-201ENST00000429025 477 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 RPL7P56-201ENST00000429441 717 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 HMGB3P24-201ENST00000433260 622 ntBASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.19□□□□□ -1.74
HIST1H1AQ02539 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms